Evidence map›Paper›PMID 31041673›Full record

ArticleMolecular biology reports2019

Chronic tinnitus and BDNF/GDNF CpG promoter methylations: a case-control study.

Seda Orenay-Boyacioglu, Metin Caliskan, Olcay Boyacioglu, Aysun Coskunoglu, Gokay Bozkurt, F Sirri Cam

Abstract read
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In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. A Systematic Review on the Genetic Contribution to Tinnitus.Journal of the Association for Research in Otolaryngology : JARO · 2024
    Pooled it
  2. Article
  3. Article
  4. DNA Methylation Patterns Associated with Tinnitus in Young Adults-A Pilot Study.Journal of the Association for Research in Otolaryngology : JARO · 2024
    Article
  5. Objective and Measurable Biomarkers in Chronic Subjective Tinnitus.International journal of molecular sciences · 2021
    Review
  6. Genetic Inheritance and Its Contribution to Tinnitus.Current topics in behavioral neurosciences · 2021
    Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Seda Orenay-BoyaciogluDepartment of Medical Genetics, Faculty of Medicine, Aydin Adnan Menderes University, Aydin, Turkey. sorenay@adu.edu.tr.ORCID http://orcid.org/0000-0003-1651-1940
Metin CaliskanDepartment of Medical Genetics, Faculty of Medicine, Aydin Adnan Menderes University, Aydin, Turkey.ORCID http://orcid.org/0000-0002-9243-4943
Olcay BoyaciogluFaculty of Engineering, Aydin Adnan Menderes University, Aydin, Turkey.ORCID http://orcid.org/0000-0003-0436-3020
Aysun CoskunogluDepartment of Medical Genetics, State Hospital of Sivas, Sivas, Turkey.
Gokay BozkurtDepartment of Medical Genetics, Faculty of Medicine, Aydin Adnan Menderes University, Aydin, Turkey.ORCID http://orcid.org/0000-0002-6963-3186
F Sirri CamDepartment of Medical Genetics, Faculty of Medicine, Manisa Celal Bayar University, Manisa, Turkey.ORCID http://orcid.org/0000-0002-0972-8896
Adnan Menderes University · TRManisa Celal Bayar University · TRSivas State Hospital · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brain-derived neurotrophic factor (BDNF) and Glial-derived neurotrophic factor (GDNF) are neurotrophic factors that play key roles in the auditory pathway. While the relationship between serum levels and polymorphisms of BDNF/GDNF and chronic tinnitus is emphasized in the literature, there is no study showing the link between the promoter methylations of these genes and tinnitus. For this purpose, the relationship between chronic tinnitus and peripheral blood derived BDNF/GDNF promoter methylations was investigated to identify their role in the pathophysiology of tinnitus. In this case-control study, we examined the possible effects of BDNF/GDNF methylations in the blood samples of patients with tinnitus complaints for more than 3 months. Sixty tinnitus subjects between the ages of 18-55 and 50 healthy control subjects in the same age group who were free of any otorhinolaryngology and systemic disease were selected for examination. Methylation of total 12 CpG sites in BDNF and GDNF promoter regions were determined by the bisulfite-pyrosequencing method. Statistically significant differences were detected between BDNF CpG6 and GDNF CpG3-5-6 methylation ratios in the comparison of control group and the chronic tinnitus patients (P = 0.002, 0.0005, 0.00003, and 0.0029, respectively). To our knowledge, this is the first study in the literature investigating the relationship between chronic tinnitus and peripheral blood derived BDNF/GDNF promoter methylations. It is believed that the current results might be supported by investigating the relationships between BDNF/GDNF methylations and genotypes in future research using higher sample sizes.

Indexed as

DNA MethylationAdolescentAdultBrain-Derived Neurotrophic FactorCase-Control StudiesCpG IslandsFemaleGenotypeGlial Cell Line-Derived Neurotrophic FactorHumansMaleMiddle AgedPolymorphism, GeneticPromoter Regions, GeneticTinnitusBDNF protein, humanBrain-Derived Neurotrophic FactorGDNF protein, humanGlial Cell Line-Derived Neurotrophic FactorBDNFBisulfite-pyrosequencingChronic tinnitusGDNFPromoter methylation

Identifiers

PMID31041673
OpenAlexW2942562795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.