Evidence map›Paper›PMID 31040275›Full record

ArticleNature communications2019

Combining 3D single molecule localization strategies for reproducible bioimaging.

Clément Cabriel, Nicolas Bourg, Pierre Jouchet, Guillaume Dupuis, Christophe Leterrier, Aurélie Baron, Marie-Ange Badet-Denisot, Boris Vauzeilles, Emmanuel Fort, Sandrine Lévêque-Fort

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Three-Dimensional Super-Resolution Passive Cavitation Mapping in Laser Lithotripsy.IEEE transactions on ultrasonics, ferroelectrics, and frequency control · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Clément CabrielInstitut des Sciences Moléculaires d'Orsay, CNRS, Univ. Paris-Sud, Université Paris-Saclay, bâtiment 520, rue André Rivière, 91405, Orsay Cedex, France. clement.cabriel@u-psud.fr.ORCID http://orcid.org/0000-0002-0316-0312
Nicolas BourgInstitut des Sciences Moléculaires d'Orsay, CNRS, Univ. Paris-Sud, Université Paris-Saclay, bâtiment 520, rue André Rivière, 91405, Orsay Cedex, France.
Pierre JouchetInstitut des Sciences Moléculaires d'Orsay, CNRS, Univ. Paris-Sud, Université Paris-Saclay, bâtiment 520, rue André Rivière, 91405, Orsay Cedex, France.
Guillaume DupuisCentre de Photonique BioMédicale, Univ. Paris-Sud, Université Paris-Saclay, CNRS, Fédération LUMAT, bâtiment 520, rue André Rivière, 91405, Orsay Cedex, France.
Christophe LeterrierAix-Marseille Université, CNRS, INP, NeuroCyto, 13284, Marseille, France.ORCID http://orcid.org/0000-0002-2957-2032
Aurélie BaronCentre de Recherche de Gif, Institut de Chimie des Substances Naturelles du CNRS, 91190, Gif-sur-Yvette, France.
Marie-Ange Badet-DenisotCentre de Recherche de Gif, Institut de Chimie des Substances Naturelles du CNRS, 91190, Gif-sur-Yvette, France.
Boris VauzeillesCentre de Recherche de Gif, Institut de Chimie des Substances Naturelles du CNRS, 91190, Gif-sur-Yvette, France.
Emmanuel FortInstitut Langevin, ESPCI Paris, PSL University, CNRS, 1 rue Jussieu, 75005, Paris, France.
Sandrine Lévêque-FortInstitut des Sciences Moléculaires d'Orsay, CNRS, Univ. Paris-Sud, Université Paris-Saclay, bâtiment 520, rue André Rivière, 91405, Orsay Cedex, France. sandrine.leveque-fort@u-psud.fr.ORCID http://orcid.org/0000-0002-9218-3363

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here, we present a 3D localization-based super-resolution technique providing a slowly varying localization precision over a 1 μm range with precisions down to 15 nm. The axial localization is performed through a combination of point spread function (PSF) shaping and supercritical angle fluorescence (SAF), which yields absolute axial information. Using a dual-view scheme, the axial detection is decoupled from the lateral detection and optimized independently to provide a weakly anisotropic 3D resolution over the imaging range. This method can be readily implemented on most homemade PSF shaping setups and provides drift-free, tilt-insensitive and achromatic results. Its insensitivity to these unavoidable experimental biases is especially adapted for multicolor 3D super-resolution microscopy, as we demonstrate by imaging cell cytoskeleton, living bacteria membranes and axon periodic submembrane scaffolds. We further illustrate the interest of the technique for biological multicolor imaging over a several-μm range by direct merging of multiple acquisitions at different depths.

Indexed as

AlgorithmsAnisotropyImaging, Three-DimensionalMicroscopyNanotechnology

Identifiers

PMID31040275
PMCPMC6491430

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.