Evidence map›Paper›PMID 31039738›Full record

ArticleBMC infectious diseases2019

Clostridium difficile isolated from faecal samples in patients with ulcerative colitis.

Parisa Shoaei, Hasan Shojaei, Mohammad Jalali, Farzin Khorvash, Sayed Mohsen Hosseini, Behrooz Ataei, Bahareh Vakili, Fatemeh Ebrahimi, Hossein Tavakoli, Zahra Esfandiari and 1 more

Abstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Global Patterns ofCrohn's & colitis 360 · 2025
    Article
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  7. Polysaccharide fromNutrients · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Drug Targeting of Inflammatory Bowel Diseases by Biomolecules.Nanomaterials (Basel, Switzerland) · 2021
    Review
  13. Review
  14. Blastocystis and Clostridioides difficile: Evidence for a Synergistic Role in Colonization Among IBD Patients with Emphasis on Ulcerative Colitis.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2021
    Article
  15. Article
  16. COVID-19: Present and Future Challenges for Dental Practice.International journal of environmental research and public health · 2020
    Review
  17. Article
  18. Intestinal Microbiota in Elderly Inpatients withInfection and drug resistance · 2020
    Article
  19. Colonization of ToxigenicFrontiers in cellular and infection microbiology · 2020
    Article
  20. Phenotypic and Genotypic Characteristics ofInfection and drug resistance · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Parisa ShoaeiNosocomial Infection Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Hasan ShojaeiDepartment of Microbiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Mohammad JalaliSchool of Food Science and Nutrition, Isfahan University of Medical Sciences, Isfahan, Iran.
Farzin KhorvashNosocomial Infection Research Center, Isfahan University of Medical Sciences, Isfahan, Iran. 2018khorvash@gmail.com.
Sayed Mohsen HosseiniEpidemiology and biostatics department, Isfahan University of Medical sciences, Isfahan, Iran.
Behrooz AtaeiInfectious Diseases and Tropical Medicine Research Center, Isfahan University of Medical Sciences, Isfahan, Iran.
Bahareh VakiliDepartment of Microbiology, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Fatemeh EbrahimiDepartment of Microbiology, Islamic Azad University of Falavarjan, Isfahan, Iran.
Hossein TavakoliDepartment of Physiology and Pathophysiology, University of Manitoba, Winnipeg, MB, Canada.
Zahra EsfandiariDepartment of Research and Development, Vice Chancellory for food and drug, Isfahan, Iran.
J Scott WeeseDepartment of Pathobiology and Centre for Public Health and Zoonoses, Ontario Veterinary College, University of Guelph, Guelph, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUlcerative colitis (UC) is an inflammatory bowel disease (IBD) that is widely identified worldwide. This study aimed to investigate the phenotypic characterization and molecular typing of Clostridium difficile isolates among patients with UC at an inflammatory bowel disease clinic in Iran.

methodsIn this cross-sectional study, conducted from April 2015 to December 2015, 85 UC patients were assessed for C.difficile infection (CDI). C. difficile isolates were characterized based on their toxin profile and antimicrobial resistance pattern. Multi-locus sequence typing analysis (MLST) and PCR ribotyping were performed to define the genetic relationships between different lineages of toxigenic strains.

resultsThe prevalence of C. difficile isolates was 31.8% (27/85) in patients, of those 15 patients (17.6%) had CDI. Three different sequence types (STs) identified based on MLST among the toxigenic isolates, that is ST54 (33.3%), ST2 (53.3%), and ST37 (13.6%). C. difficile strains were divided into four different PCR-ribotypes (012, 014, 017 and IR1). The most common ribotype was 014 accounting for 48.3% (7/15) of all strains. The strains isolated during the first episode and recurrence of CDI usually belonged to PCR ribotype 014 (ST2). A high rate of CDI recurrence (14.1%, 12/85) experienced in UC patients. Colonization of the gastrointestinal tract with non-toxigenic C. difficile strains was frequent among patients with mild disease. All C. difficile isolates were susceptible to metronidazole, and vancomycin, 86 and 67% of isolates were resistant to clindamycin and erythromycin respectively. There was no correlation between the toxin type and antibiotic resistance (p > 0.05).

conclusionOverall CDI is rather prevalent in UC patients. All patients with CDI experienced moderate to severe disease and exposed to different antimicrobial and anti-inflammatory agents. Close monitoring and appropriate management including early detection and fast treatment of CDI will improve UC outcomes.

Indexed as

AdultAnti-Bacterial AgentsAnti-Inflammatory AgentsClostridioides difficileClostridium InfectionsColitis, UlcerativeCross-Sectional StudiesDNA, BacterialDrug Resistance, BacterialFecesFemaleGastrointestinal TractHumansLogistic ModelsMaleMicrobial Sensitivity TestsAnti-Bacterial AgentsAnti-Inflammatory AgentsDNA, BacterialClostridium difficileIBD patientsMultilocus sequence typingPCR-RibotypingUlcerative Colitis

Identifiers

PMID31039738
PMCPMC6492486

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.