Evidence map›Paper›PMID 31039735›Full record

ArticleBMC plant biology2019

Effect of drought stress on the genetic architecture of photosynthate allocation and remobilization in pods of common bean (Phaseolus vulgaris L.), a key species for food security.

Jorge C Berny Mier Y Teran, Enéas R Konzen, Antonia Palkovic, Siu M Tsai, Idupulapati M Rao, Stephen Beebe, Paul Gepts

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
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  4. Plants (Basel, Switzerland) · 2023
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  12. ContrastingFrontiers in plant science · 2022
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  13. International journal of molecular sciences · 2021
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  15. Toward the introgression of PvPdh1 for increased resistance to pod shattering in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Jorge C Berny Mier Y TeranDepartment of Plant Sciences, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0003-3709-9131
Enéas R KonzenDepartment of Plant Sciences, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0001-5176-7410
Antonia PalkovicDepartment of Plant Sciences, University of California, Davis, CA, USA.
Siu M TsaiCell and Molecular Biology Laboratory, Centro de Energia Nuclear na Agricultura (CENA), Universidade de São Paulo, Piracicaba, SP, Brazil.
Idupulapati M RaoCentro Internacional de Agricultura Tropical (CIAT), Cali, Colombia.
Stephen BeebeCentro Internacional de Agricultura Tropical (CIAT), Cali, Colombia.
Paul GeptsDepartment of Plant Sciences, University of California, Davis, CA, USA. plgepts@ucdavis.edu.ORCID http://orcid.org/0000-0002-1056-4665
University of California, Davis · USInternational Center for Tropical Agriculture · CONational Center for Agricultural Utilization Research · USUniversidade de São Paulo · BRUniversidade Federal do Rio Grande do Sul · BRUniversity of California System · US

Funding

USDA NIFA AFRI 2016-67013-24460
6 · The paper itself

Abstract

backgroundCommon bean is the most important staple grain legume for direct human consumption and nutrition. It complements major sources of carbohydrates, including cereals, root crop, or plantain, as a source of dietary proteins. It is also a significant source of vitamins and minerals like iron and zinc. To fully play its nutritional role, however, its robustness against stresses needs to be strengthened. Foremost among these is drought, which commonly affects its productivity and seed quality. Previous studies have shown that photosynthate remobilization and partitioning is one of the main mechanisms of drought tolerance and overall productivity in common bean.

resultsIn this study, we sought to determine the inheritance of pod harvest index (PHI), a measure of the partitioning of pod biomass to seed biomass, relative to that of grain yield. We evaluated a recombinant inbred population of the cross of ICA Bunsi and SXB405, both from the Mesoamerican gene pool, to determine the effects of intermittent and terminal drought stresses on the genetic architecture of photosynthate allocation and remobilization in pods of common bean. The population was grown for two seasons, under well-watered conditions and terminal and intermittent drought stress in one year, and well-watered conditions and terminal drought stress in the second year. There was a significant effect of the water regime and year on all the traits, at both the phenotypic and QTL levels. We found nine QTLs for pod harvest index, including a major (17% of variation explained), stable QTL on linkage group Pv07. We also found eight QTLs for yield, three of which clustered with PHI QTLs, underscoring the importance of photosynthate remobilization in productivity. We also found evidence for substantial epistasis, explaining a considerable part of the variation for yield and PHI.

conclusionOur results highlight the genetic relationship between PHI and yield and confirm the role of PHI in selection of both additive and epistatic effects controlling drought tolerance. These results are a key component to strengthen the robustness of common bean against drought stresses.

Indexed as

DroughtsPhotosynthesisBiomassEpistasis, GeneticFood SupplyGenetic PleiotropyPhaseolusQuantitative Trait, HeritableSeedsStress, PhysiologicalAbiotic stressEpistasisPhotosynthate remobilizationPod harvest indexQuantitative trait loci

Identifiers

PMID31039735
PMCPMC6492436
OpenAlexW2945236347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.