Evidence map›Paper›PMID 31038847›Full record

ArticleCancer medicine2019

Genetic variants in a long noncoding RNA related to Sunitinib Resistance predict risk and survival of patients with renal cell carcinoma.

Qianwei Xing, Ran Li, Aiming Xu, Zhiqiang Qin, Jinyuan Tang, Lei Zhang, Min Tang, Peng Han, Wei Wang, Chao Qin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Qianwei XingDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Ran LiDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Aiming XuDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Zhiqiang QinDepartment of Urology Surgery, Nanjing First Hospital, Nanjing Medical University, Nanjing, China.
Jinyuan TangDepartment of Urology, Jiangsu Province Hospital of TCM, Affiliated Hospital of Nanjing University of TCM, Nanjing, China.
Lei ZhangDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Min TangDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Peng HanDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Wei WangDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Chao QinDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Mulong DuDepartment of Biostatistics, School of Public Health, Nanjing Medical University, Nanjing, China.
Wei ZhangDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.ORCID 0000-0003-2097-6089
Jiangsu Province Hospital · CNNanjing Medical University · CNNanjing Traditional Chinese Medicine Hospital · CNNantong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveLncARSR (lncRNA Activated in RCC with Sunitinib Resistance, ENST00000424980) is a newly identified lncRNA to promote the sunitinib resistance of renal cell carcinoma (RCC), which may contribute to tumorigenesis and progression. This study aimed to explore the association of lncARSR tagSNPs with the risk and prognosis of RCC.

methodsIn this study, a 2-stage case-control study was performed to evaluate the association between 2 tagging SNPs (rs1417080 and rs7859384) and RCC susceptibility. Odds ratios (ORs) and 95% confidence intervals (CIs) were obtained by unconditional logistic regression analyses. Different survival time was estimated by the Kaplan-Meier method and compared by the Log-rank test. Hazard ratios (HRs) and their 95% CIs were calculated to determine predictive factors by Cox proportion hazards model.

resultsWhen combing discovery and validation sets together, rs7859384 was determined to be significantly associated with the decreased RCC risk with all P < 0.05 in 4 models (co-dominant model, additive model, dominant model and recessive model). stratified analyses showed prominent risk effect of SNP rs7859384 GA/GG genotypes was found in clinical subgroups of stage I and stage II (P = 0.009, OR = 0.77, 95% CI = 0.64-0.94) and individuals with clear cell RCC (P = 0.014, OR = 0.79, 95% CI = 0.65-0.95). A protective effect of SNP rs7859384 GA/GG genotypes was observed among individuals with BMI > 24 (P = 0.025, OR = 0.74, 95% CI = 0.56-0.96), without hypertension (P = 0.037, OR = 0.79, 95% CI = 0.63-0.99), without family history of cancer (P = 0.048, OR = 0.83, 95% CI = 0.68-1.00). Survival analyses revealed individuals with GA/GG genotypes had higher survival rate compared with the corresponding AA wild genotypes in the dominant model (log-rank P = 0.005, adjusted HR = 0.34, 95% CI = 0.16-0.73).

conclusionThis study suggests that rs7859384 of lncARSR was associated with RCC susceptibility and may act as a prognostic biomarker for patients with RCC.

Indexed as

Genetic VariationAdultAgedAllelesCarcinoma, Renal CellDrug Resistance, NeoplasmFemaleGenotypeHumansKaplan-Meier EstimateKidney NeoplasmsLinkage DisequilibriumMaleMiddle AgedOdds RatioPolymorphism, Single NucleotideRNA, Long NoncodingSunitinibLncARSRrenal cell carcinomaSNPs

Identifiers

PMID31038847
PMCPMC6558481
OpenAlexW2943764164

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.