Evidence map›Paper›PMID 31038449›Full record

ArticleMicrobial genomics2019

Caribbean multi-centre study of Klebsiella pneumoniae: whole-genome sequencing, antimicrobial resistance and virulence factors.

Eva Heinz, Richard Brindle, Andrina Morgan-McCalla, Keisha Peters, Nicholas R Thomson

Abstract read
In one paragraph

Article in Microbial genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Emerging carbapenem-resistantMicrobiology spectrum · 2025
    Article
  5. Review
  6. Virulence Factors inIndian journal of microbiology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Molecular Epidemiology of Carbapenem-ResistantAntibiotics (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Emergence of a Novel Lineage and Wide Spread of aAntibiotics (Basel, Switzerland) · 2022
    Article
  13. Antimicrobial Resistance and Virulence Characteristics ofPathogens (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Reporting on antibiotic use patterns using the WHO Access, Watch, Reserve classification in the Caribbean.Revista panamericana de salud publica = Pan American journal of public health · 2022
    Article
  16. Prevalence and distribution of ampc beta-lactamase producingFrontiers in cellular and infection microbiology · 2022
    Article
  17. One Health Genomic Study of Human and AnimalAntibiotics (Basel, Switzerland) · 2021
    Article
  18. Article
  19. Observational
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eva Heinz1​Wellcome Trust Sanger Institute, Hinxton, UK.
Richard Brindle3​Caribbean Public Health Agency, Port of Spain, Trinidad and Tobago.
Andrina Morgan-McCalla3​Caribbean Public Health Agency, Port of Spain, Trinidad and Tobago.
Keisha Peters3​Caribbean Public Health Agency, Port of Spain, Trinidad and Tobago.
Nicholas R Thomson1​Wellcome Trust Sanger Institute, Hinxton, UK.

Funding

Wellcome Trust
6 · The paper itself

Abstract

The surveillance of antimicrobial-resistant isolates has proven to be one of the most valuable tools to understand the global rise of multidrug-resistant bacterial pathogens. We report the first insights into the current situation in the Caribbean, where a pilot project to monitor antimicrobial resistance (AMR) through phenotypic resistance measurements combined with whole-genome sequencing was set up in collaboration with the Caribbean Public Health Agency (CARPHA). Our first study focused on Klebsiella pneumoniae, a highly relevant organism amongst the Gram-negative opportunistic pathogens worldwide causing hospital- and community-acquired infections. Our results show that not only carbapenem resistance, but also hypervirulent strains, are circulating in patients in the Caribbean. Our current data does not allow us to infer their prevalence in the population. We argue for the urgent need to further support AMR surveillance and stewardship in this almost uncharted territory, which can make a significant impact on the reduction of antimicrobial usage. This article contains data hosted by Microreact (https://microreact.org).

Indexed as

Whole Genome SequencingAnti-Bacterial AgentsCarbapenemsCaribbean RegionCommunity-Acquired InfectionsDrug Resistance, Multiple, BacterialGenes, BacterialGenome, BacterialHumansKlebsiella InfectionsKlebsiella pneumoniaePhylogenyPilot ProjectsVirulence FactorsAnti-Bacterial AgentsCarbapenemsVirulence Factorsantimicrobial resistancegenomicsKlebsiella pneumoniae

Identifiers

PMID31038449
PMCPMC6562249

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.