Evidence map›Paper›PMID 31036904›Full record

ArticleScientific reports2019

Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory.

Jonas Osterloff, Ingunn Nilssen, Johanna Järnegren, Tom Van Engeland, Pål Buhl-Mortensen, Tim W Nattkemper

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jonas OsterloffBiodata Mining Group, Faculty of Technology, Bielefeld University, PO Box 33501, Bielefeld, Germany.ORCID http://orcid.org/0000-0002-5962-5326
Ingunn NilssenEquinor, Research and Technology, 7005, Trondheim, Norway.
Johanna JärnegrenNorwegian Institute for Nature Research, P.O. Box 5685 Torgarden, 7485, Trondheim, Norway.
Tom Van EngelandNIOZ Royal Netherlands Institute for Sea Research, Department of Estuarine and Delta Systems, Utrecht University, Korringaweg 7, 4401NT Yerseke, the Netherlands.ORCID http://orcid.org/0000-0002-3590-8831
Pål Buhl-MortensenResearch Group Benthic Habitat, Institute of Marine Research, 5817, Bergen, Norway.
Tim W NattkemperBiodata Mining Group, Faculty of Technology, Bielefeld University, PO Box 33501, Bielefeld, Germany. tim.nattkemper@uni-bielefeld.de.ORCID http://orcid.org/0000-0002-7986-1158

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral (Lophelia pertusa) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing changes in coral colour and polyp activity (feeding). The image data was analysed together with data from the other sensors from the same period, to provide new insights into the short- and long-term dynamics in polyp features. The results indicate that diurnal variations and tidal current influenced polyp activity, by controlling the food supply. On a longer time-scale, the coral's tissue colour changed from white in the spring to slightly red during the summer months, which can be explained by a seasonal change in food supply. Our work shows, that using an effective integrative computational approach, the image time series is a new and rich source of information to understand and monitor the dynamics in underwater environments due to the high temporal resolution and coverage enabled with FUOs.

Indexed as

Coral ReefsVideo RecordingAnimalsAnthozoaBiodiversityColorDeep LearningFeeding BehaviorGeologic SedimentsSeawater

Identifiers

PMID31036904
PMCPMC6488648

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.