ArticleBMC genomics2019
Transcriptomic reprogramming of barley seminal roots by combined water deficit and salt stress.
Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed.
- Comparative Transcriptome Analysis of Leaves and Roots Responses in Salt-Tolerant Barley Line CC89/Giza123 Under Salinity Stress.Current issues in molecular biology · 2026Article
- Decoding core molecular mechanisms of heat-stress tolerance in Brassica napus using transcriptomics and machine learning.Plant cell reports · 2026Article
- Unravelling the molecular mechanism underlying drought stress tolerance in Dinanath (Pennisetum pedicellatum Trin.) grass via integrated transcriptomic and metabolomic analyses.BMC plant biology · 2024Article
- Spatiotemporal transcriptomic plasticity in barley roots: unravelling water deficit responses in distinct root zones.BMC genomics · 2024Article
- Unveiling the role of epigenetic mechanisms and redox signaling in alleviating multiple abiotic stress in plants.Frontiers in plant science · 2024Review
- RNAseq of diverse spring wheat cultivars released during last 110 years.Scientific data · 2023Article
- Physiological, Epigenetic, and Transcriptome Analyses Provide Insights into the Responses of Wheat Seedling Leaves to Different Water Depths under Flooding Conditions.International journal of molecular sciences · 2023Article
- Transcriptome and GWAS Analyses Reveal Candidate Gene for Root Traits of Alfalfa during Germination under Salt Stress.International journal of molecular sciences · 2023Article
- Application of RNA sequencing to understand the response of rice seedlings to salt-alkali stress.BMC genomics · 2023Article
- Harnessing the role of mitogen-activated protein kinases against abiotic stresses in plants.Frontiers in plant science · 2023Review
- Global transcriptome profiling reveals root- and leaf-specific responses of barley (Frontiers in plant science · 2023Article
- Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties.BMC plant biology · 2022Article
- Conventional and Omics Approaches for Understanding the Abiotic Stress Response in Cereal Crops-An Updated Overview.Plants (Basel, Switzerland) · 2022Review
- Effects of Salt Stress on Transcriptional and Physiological Responses in Barley Leaves with Contrasting Salt Tolerance.International journal of molecular sciences · 2022Article
- Heat and drought induced transcriptomic changes in barley varieties with contrasting stress response phenotypes.Frontiers in plant science · 2022Article
- Article
- Transcriptomic Analysis of Salt-Stress-Responsive Genes in Barley Roots and Leaves.International journal of molecular sciences · 2021Article
- Genetic control of root plasticity in response to salt stress in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Retracted Article: Investigation of yellow horn (RSC advances · 2020Article
- Harnessing Transcription Factors as Potential Tools to Enhance Grain Size Under Stressful Abiotic Conditions in Cereal Crops.Frontiers in plant science · 2020Review
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
backgroundWater deficit and soil salinity substantially influence plant growth and productivity. When occurring individually, plants often exhibit reduced growth resulting in yield losses. The simultaneous occurrence of these stresses enhances their negative effects. Unraveling the molecular mechanisms of combined abiotic stress responses is essential to secure crop productivity under unfavorable environmental conditions.
resultsThis study examines the effects of water deficit, salinity and a combination of both on growth and transcriptome plasticity of barley seminal roots by RNA-Seq. Exposure to water deficit and combined stress for more than 4 days significantly reduced total seminal root length. Transcriptome sequencing demonstrated that 60 to 80% of stress type-specific gene expression responses observed 6 h after treatment were also present after 24 h of stress application. However, after 24 h of stress application, hundreds of additional genes were stress-regulated compared to the short 6 h treatment. Combined salt and water deficit stress application results in a unique transcriptomic response that cannot be predicted from individual stress responses. Enrichment analyses of gene ontology terms revealed stress type-specific adjustments of gene expression. Further, global reprogramming mediated by transcription factors and consistent over-representation of basic helix-loop-helix (bHLH) transcription factors, heat shock factors (HSF) and ethylene response factors (ERF) was observed.
conclusionThis study reveals the complex transcriptomic responses regulating the perception and signaling of multiple abiotic stresses in barley.
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