Evidence map›Paper›PMID 31035716›Full record

ArticleInternational journal of molecular sciences2019

Neurite Outgrowth and Morphological Changes Induced by 8-trans Unsaturation of Sphingadienine in kCer Molecular Species.

Seigo Usuki, Noriko Tamura, Tomohiro Tamura, Kunikazu Tanji, Daisuke Mikami, Katsuyuki Mukai, Yasuyuki Igarashi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Seigo UsukiLipid Biofunction Section, Frontier Research Center for Advanced Material and Life Science, Faculty of Advanced Life Science, Hokkaido University, Sapporo 011-0021, Japan. susuki@sci.hokudai.ac.jp.
Noriko TamuraNational Institute of Advanced Industrial Science and Technology (AIST), Sapporo 061-8517, Japan. n-tamura@aist.go.jp.
Tomohiro TamuraNational Institute of Advanced Industrial Science and Technology (AIST), Sapporo 061-8517, Japan. t-tamura@aist.go.jp.
Kunikazu TanjiDepartment of Neuropathology, Institute of Brain Science, Hirosaki University Graduate School of Medicine, Hirosaki 036-8562, Japan. kunikazu@hirosaki-u.ac.jp.ORCID 0000-0002-5202-2215
Daisuke MikamiLipid Biofunction Section, Frontier Research Center for Advanced Material and Life Science, Faculty of Advanced Life Science, Hokkaido University, Sapporo 011-0021, Japan. dmikami@sci.hokudai.ac.jp.
Katsuyuki MukaiR&D Headquarters, Daicel Corporation, Tokyo 108-8230, Japan. kt_mukai@jp.daicel.com.
Yasuyuki IgarashiLipid Biofunction Section, Frontier Research Center for Advanced Material and Life Science, Faculty of Advanced Life Science, Hokkaido University, Sapporo 011-0021, Japan. yigarash@pharm.hokudai.ac.jp.
Hokkaido University · JPNational Institute of Advanced Industrial Science and Technology · JPDaicel (Japan) · JPHirosaki University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Konjac ceramide (kCer), which consists of plant-type molecular species of characteristic shingoid bases and fatty acids, is prepared from konjac glucosylceramide GlcCer by chemoenzymatical deglucosylation. kCer activates the semaphorin 3A (Sema3A) signaling pathway, inducing collapsin response mediator protein 2 (CRMP2) phosphorylation. This results in neurite outgrowth inhibition and morphological changes in remaining long neurites in PC12 cells. Whether a specific molecular species of kCer can bind to the Sema3A receptor (Neuropilin1, Nrp1) and activate the Sema3A signaling pathway remains unknown. Here, we prepared kCer molecular species using endoglycoceramidase I-mediated deglucosylation and examined neurite outgrowth and phosphorylation of collapsin response mediator protein 2 in nerve growth factor (NGF)-primed cells. The 8-trans unsaturation of sphingadienine of kCer was essential for Sema3A-like signaling pathway activation. Conversely, 8-cis unsaturation of kCer molecular species had no effect on Sema3A-like activation, and neurite outgrowth inhibition resulted in remaining short neurites. In addition, α-hydroxylation of fatty acids was not associated with the Sema3A-like activity of the kCer molecular species. These results suggest that 8-trans or 8-cis isomerization of sphingadienine determines the specific interactions at the ligand-binding site of Nrp1.

Indexed as

AmorphophallusAnimalsCell LineEthanolaminesEvolution, MolecularFatty AcidsHumansIntercellular Signaling Peptides and ProteinsMiceNerve Tissue ProteinsNeuronal OutgrowthPhosphorylationSemaphorin-3Acollapsin response mediator protein-2EthanolaminesFatty AcidsIntercellular Signaling Peptides and ProteinsNerve Tissue ProteinsSemaphorin-3Asphingadienineceramideendoglycoceramidasekonjacneurite outgrowthneuropilin1semaphorin3Asphingadienine

Identifiers

PMID31035716
PMCPMC6540580
OpenAlexW2941897480

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.