Evidence map›Paper›PMID 31035580›Full record

ArticleInternational journal of molecular sciences2019

Development-Related miRNA Expression and Target Regulation during Staggered In Vitro Plant Regeneration of Tuxpeño VS-535 Maize Cultivar.

Brenda A López-Ruiz, Vasti T Juárez-González, Estela Sandoval-Zapotitla, Tzvetanka D Dinkova

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
11.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. microRNAs and Their Roles in Plant Development.Frontiers in plant science · 2022
    Review
  8. miR160: An Indispensable Regulator in Plant.Frontiers in plant science · 2022
    Review
  9. Article
  10. Review
  11. Article
  12. Epigenetic Regulation of Auxin-Induced Somatic Embryogenesis in Plants.International journal of molecular sciences · 2020
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Brenda A López-RuizDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, 04510 Ciudad de México, CDMX, Mexico. ana_bell_89@hotmail.com.
Vasti T Juárez-GonzálezDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, 04510 Ciudad de México, CDMX, Mexico. vasti.juarez.gonzalez@gmail.com.
Estela Sandoval-ZapotitlaJardín Botánico, Instituto de Biología, Universidad Nacional Autónoma de México, 04510 Ciudad de México, CDMX, Mexico. esz@ib.unam.mx.
Tzvetanka D DinkovaDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, 04510 Ciudad de México, CDMX, Mexico. cesy@unam.mx.ORCID 0000-0001-7971-525X
Universidad Nacional Autónoma de México · MX

Funding

Repurposing TRM for tumor immunotherapyR01CA238439 · NCI · UNIVERSITY OF MINNESOTA · PI MASOPUST, DAVID · 2020 to 2024
$2.5M
Consejo Nacional de Ciencia y Tecnología 238439Universidad Nacional Autónoma de México PAPIIT IN211215 and IN214118, PAIP 5000-9118
6 · The paper itself

Abstract

In vitro plant regeneration addresses basic questions of molecular reprogramming in the absence of embryonic positional cues. The process is highly dependent on the genotype and explant characteristics. However, the regulatory mechanisms operating during organ differentiation from in vitro cultures remain largely unknown. Recently, miRNAs have emerged as key regulators during embryogenic callus induction, plant differentiation, auxin responses and totipotency. Here, we explored how development-related miRNA switches the impact on their target regulation depending on physiological and molecular events taking place during maize Tuxpeño VS-535 in vitro plant regeneration. Three callus types with distinctive regeneration potential were characterized by microscopy and histological preparations. The embryogenic calli (EC) showed higher miRNA levels than non-embryogenic tissues (NEC). An inverse correlation for miR160 and miR166 targets was found during EC callus induction, whereas miR156, miR164 and miR394 displayed similar to their targets RNA accumulation levels. Most miRNA accumulation switches took place early at regenerative spots coincident with shoot apical meristem (SAM) establishment, whereas miR156, miR160 and miR166 increased at further differentiation stages. Our data uncover particular miRNA-mediated regulation operating for maize embryogenic tissues, supporting their regulatory role in early SAM establishment and basipetala growth during the in vitro regeneration process.

Indexed as

Gene Expression Regulation, PlantRNA InterferenceMicroRNAsOrgan SpecificityPhenotypePlant DevelopmentPlant ShootsRegenerationZea maysMicroRNAscallusde novo shoot regenerationmaizemicroscopymiRNA regulation

Identifiers

PMID31035580
PMCPMC6539278
OpenAlexW2940618645

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.