Evidence map›Paper›PMID 31035542›Full record

ArticleInternational journal of molecular sciences2019

Deep Learning/Artificial Intelligence and Blood-Based DNA Epigenomic Prediction of Cerebral Palsy.

Ray O Bahado-Singh, Sangeetha Vishweswaraiah, Buket Aydas, Nitish Kumar Mishra, Chittibabu Guda, Uppala Radhakrishna

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 50 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Neural Network Aided Detection of Huntington Disease.Journal of clinical medicine · 2022
    Article
  12. Review
  13. An Emerging Role for Epigenetics in Cerebral Palsy.Journal of personalized medicine · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. New Ethical Issues in Cerebral Palsy.Frontiers in neurology · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ray O Bahado-SinghDepartment of Obstetrics and Gynecology, Oakland University William Beaumont School of Medicine, Royal Oak, MI 48073, USA. Ray.Bahado-Singh@beaumont.org.
Sangeetha VishweswaraiahDepartment of Obstetrics and Gynecology, Oakland University William Beaumont School of Medicine, Royal Oak, MI 48073, USA. Sangeetha.Vishweswaraiah@beaumont.org.
Buket AydasDepartment of Mathematics & Computer Science, Albion College, Albion, MI 49224, USA. baydas@albion.edu.
Nitish Kumar MishraDept. of Genetics, Cell Biology & Anatomy, College of Medicine, University of Nebraska Medical Center, Omaha, NE 68182, USA. nitish.mishra@unmc.edu.
Chittibabu GudaDept. of Genetics, Cell Biology & Anatomy, College of Medicine, University of Nebraska Medical Center, Omaha, NE 68182, USA. babu.guda@unmc.edu.ORCID 0000-0002-5393-9316
Uppala RadhakrishnaDepartment of Obstetrics and Gynecology, Oakland University William Beaumont School of Medicine, Royal Oak, MI 48073, USA. Uppala.radhakrishna@beaumont.edu.
Oakland University · USUniversity of Nebraska Medical Center · USAlbion College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The etiology of cerebral palsy (CP) is complex and remains inadequately understood. Early detection of CP is an important clinical objective as this improves long term outcomes. We performed genome-wide DNA methylation analysis to identify epigenomic predictors of CP in newborns and to investigate disease pathogenesis. Methylation analysis of newborn blood DNA using an Illumina HumanMethylation450K array was performed in 23 CP cases and 21 unaffected controls. There were 230 significantly differentially-methylated CpG loci in 258 genes. Each locus had at least 2.0-fold change in methylation in CP versus controls with a FDR

Indexed as

Artificial IntelligenceCell-Free Nucleic AcidsDeep LearningEpigenesis, GeneticCase-Control StudiesCerebral PalsyCpG IslandsDNA MethylationEpigenomicsGene Expression ProfilingGene Regulatory NetworksHumansInfant, NewbornROC CurveCell-Free Nucleic Acidscerebral palsyDNA methylationepigeneticsneurodegenerative disordersnewborns

Identifiers

PMID31035542
PMCPMC6539236
OpenAlexW2941891803

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.