Evidence map›Paper›PMID 31035529›Full record

ArticleGenes2019

Cloning of

Deguang Sun, Xiaonan Zang, Yalin Guo, Dongfang Xiao, Xuexue Cao, Zhu Liu, Feng Zhang, Yuming Jin, Jiawei Shi, Zhendong Wang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Deguang SunKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. sundeguang@stu.ouc.edu.cn.
Xiaonan ZangKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. xnzang@ouc.edu.cn.
Yalin GuoKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. 17669475369@163.com.
Dongfang XiaoKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. 18753364418@163.com.
Xuexue CaoKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. caoxuex@126.com.
Zhu LiuKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. liuzhu@stu.ouc.edu.cn.
Feng ZhangKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. zfhhxxttxs@163.com.
Yuming JinKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. happycyz@126.com.
Jiawei ShiKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. shijiawei@stu.ouc.edu.cn.
Zhendong WangKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. zhendongya123@163.com.
Rui LiKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. LRlirui0611@163.com.
Zhaxi YangzongKey Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, Shandong, China. zxyz1773494902@163.com.
Ocean University of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to study the assembly mechanism of phycocyanin in red algae, the apo-phycocyanin genes (pcB and pcA) were cloned from Gracilariopsis lemaneiformis. The full length of phycocyanin β-subunit (pcB) contained 519 nucleotides encoding a protein of 172 amino acids, and the full length of phycocyanin α-subunit(pcA) contained 489 nucleotides encoding a protein of 162 amino acids. Expression vector pACYCDuet-pcB-pcA was constructed and transformed into E. coli BL21 with pET-ho-pcyA (containing ho and pcyA gene to synthesize phycocyanobilin). The recombinant strain showed fluorescence activity, indicating the expression of optically active phycocyanin in E. coli. To further investigate the possible binding sites between phycocyanobilin and apo-phycocyanin, Cys-82 and Cys-153 of the β subunit and the Cys-84 of the α subunit were respectively mutated, and four mutants were obtained. All mutant strains had lower fluorescence intensity than the non-mutant strains, which indicated that these mutation sites could be the active binding sites between apo-phycocyanin and phycocyanobilin (PCB). This research provides a supplement for the comprehensive understanding of the assembly mechanism of optically active phycocyanin in red algae.

Indexed as

Amino Acid SequenceBinding SitesCloning, MolecularEscherichia coliMutationPhycobilinsPhycocyaninRhodophytaPhycobilinsPhycocyaninphycocyanobilincloningexpressionfluorescenceGracilariopsis lemaneiformisphycocyanin

Identifiers

PMID31035529
PMCPMC6562448
OpenAlexW2942303122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.