Evidence map›Paper›PMID 31034888›Full record

ArticleJournal of molecular biology2019

NMR Resonance Assignment Methodology: Characterizing Large Sparsely Labeled Glycoproteins.

Gordon R Chalmers, Alexander Eletsky, Laura C Morris, Jeong-Yeh Yang, Fang Tian, Robert J Woods, Kelley W Moremen, James H Prestegard

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. A comprehensive assessment of selective amino acidJournal of biomolecular NMR · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Glycan structures and their interactions with proteins. A NMR view.Current opinion in structural biology · 2020
    Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gordon R ChalmersComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Alexander EletskyComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Laura C MorrisComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Jeong-Yeh YangComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Fang TianComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Robert J WoodsComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Kelley W MoremenComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
James H PrestegardComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA. Electronic address: jpresteg@ccrc.uga.edu.
University of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
NMR of Cell Surface OligosaccharidesR01GM033225 · NIGMS · YALE UNIVERSITY · PI PRESTEGARD, JAMES H. · 1985 to 2021
$4.6M
NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM033225
6 · The paper itself

Abstract

Characterization of proteins using NMR methods begins with assignment of resonances to specific residues. This is usually accomplished using sequential connectivities between nuclear pairs in proteins uniformly labeled with NMR active isotopes. This becomes impractical for larger proteins, and especially for proteins that are best expressed in mammalian cells, including glycoproteins. Here an alternate protocol for the assignment of NMR resonances of sparsely labeled proteins, namely, the ones labeled with a single amino acid type, or a limited subset of types, isotopically enriched with

Indexed as

AlgorithmsAnimalsGlycoproteinsHEK293 CellsHumansModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein ConformationRatsSialyltransferasesSoftwareGlycoproteinsSialyltransferasesgenetic algorithmligand dockingmammalian cell culturemolecular dynamicssialyltransferase

Identifiers

PMID31034888
PMCPMC6554063
OpenAlexW2940704580

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.