Evidence map›Paper›PMID 31034465›Full record

ArticlePLoS genetics2019

Mutations in PIK3C2A cause syndromic short stature, skeletal abnormalities, and cataracts associated with ciliary dysfunction.

Dov Tiosano, Hagit N Baris, Anlu Chen, Marrit M Hitzert, Markus Schueler, Federico Gulluni, Antje Wiesener, Antonio Bergua, Adi Mory, Brett Copeland and 16 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Inactivation of PI3K-C2α deregulates cell death pathways and sensitizes to endotoxic shock.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. PI(4,5)PBio-protocol · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Elucidating the clinical and genetic spectrum of inositol polyphosphate phosphatase INPP4A-related neurodevelopmental disorder.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
    Article
  10. Article
  11. Review
  12. Phosphoinositides in New Spaces.Cold Spring Harbor perspectives in biology · 2023
    Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Phosphoinositides as membrane organizers.Nature reviews. Molecular cell biology · 2022
    Review
  19. Phosphoinositide 3-Kinases as Potential Targets for Thrombosis Prevention.International journal of molecular sciences · 2022
    Review
  20. Phosphoinositide Conversion Inactivates R-RAS and Drives Metastases in Breast Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 10 institutions in 5 countries.

Dov TiosanoDivision of Pediatric Endocrinology, Ruth Children's Hospital, Rambam Medical Center, Haifa, Israel.
Hagit N BarisRappaport Family Faculty of Medicine, Technion-Israel Institute of Technology, Haifa, Israel.
Anlu ChenDepartment of Biochemistry, Case Western Reserve University, Cleveland, Ohio, United States of America.
Marrit M HitzertDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.
Markus SchuelerDepartment of Nephrology and Hypertension, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Federico GulluniDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Center, University of Turin, Torino, Italy.
Antje WiesenerInstitute of Human Genetics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Antonio BerguaDepartment of Ophthalmology, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Adi MoryThe Genetics Institute, Rambam Health Care Campus, Haifa, Israel.ORCID 0000-0003-0487-9633
Brett CopelandLaboratory of Pediatric Brain Diseases, Rockefeller University, New York, New York, United States of America.
Joseph G GleesonLaboratory of Pediatric Brain Diseases, Rockefeller University, New York, New York, United States of America.
Patrick RumpDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands.ORCID 0000-0003-4059-0247
Hester van MeerDepartment of Pediatrics, Beatrix Children's Hospital, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
Deborah A SivalDepartment of Pediatrics, Beatrix Children's Hospital, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
Volker HauckeLeibniz-Institut für Molekulare Pharmakologie, Berlin Faculty of Biology, Chemistry, and Pharmacy, Freie Universität Berlin, Berlin, Germany.ORCID 0000-0003-3119-6993
Josh KriwinskyDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, Ohio, United States of America.ORCID 0000-0001-8819-6973
Karl X KnaupDepartment of Nephrology and Hypertension, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
André ReisInstitute of Human Genetics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Nadine N HauerInstitute of Human Genetics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Emilio HirschDepartment of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Center, University of Turin, Torino, Italy.
Ronald RoepmanDepartment of Human Genetics, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Rolph PfundtDepartment of Human Genetics, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0002-0584-4398
Christian T ThielInstitute of Human Genetics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.ORCID 0000-0003-3817-7277
Michael S WiesenerDepartment of Nephrology and Hypertension, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
Mariam G AslanyanDepartment of Human Genetics, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0001-5675-2031
David A BuchnerDepartment of Biochemistry, Case Western Reserve University, Cleveland, Ohio, United States of America.ORCID 0000-0003-3920-4871
Friedrich-Alexander-Universität Erlangen-Nürnberg · DEUniversity Medical Center Groningen · NLCase Western Reserve University · USRadboud University Nijmegen · NLTechnion – Israel Institute of Technology · ILUniversity of Turin · ITLeibniz-Forschungsinstitut für Molekulare Pharmakologie · DERambam Health Care Campus · ILRockefeller University · USUniversity of California San Diego · US

Funding

Molecular regulation of PPARg signaling and adipocyte functionR56DK112846 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BUCHNER, DAVID A · 2017 to 2017
$400k
Epistatic Regulation of Gene ExpressionR03DK099533 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BUCHNER, DAVID A · 2014 to 2015
$159k
NIDDK NIH HHS R03 DK099533NIDDK NIH HHS R56 DK112846
6 · The paper itself

Abstract

PIK3C2A is a class II member of the phosphoinositide 3-kinase (PI3K) family that catalyzes the phosphorylation of phosphatidylinositol (PI) into PI(3)P and the phosphorylation of PI(4)P into PI(3,4)P2. At the cellular level, PIK3C2A is critical for the formation of cilia and for receptor mediated endocytosis, among other biological functions. We identified homozygous loss-of-function mutations in PIK3C2A in children from three independent consanguineous families with short stature, coarse facial features, cataracts with secondary glaucoma, multiple skeletal abnormalities, neurological manifestations, among other findings. Cellular studies of patient-derived fibroblasts found that they lacked PIK3C2A protein, had impaired cilia formation and function, and demonstrated reduced proliferative capacity. Collectively, the genetic and molecular data implicate mutations in PIK3C2A in a new Mendelian disorder of PI metabolism, thereby shedding light on the critical role of a class II PI3K in growth, vision, skeletal formation and neurological development. In particular, the considerable phenotypic overlap, yet distinct features, between this syndrome and Lowe's syndrome, which is caused by mutations in the PI-5-phosphatase OCRL, highlight the key role of PI metabolizing enzymes in specific developmental processes and demonstrate the unique non-redundant functions of each enzyme. This discovery expands what is known about disorders of PI metabolism and helps unravel the role of PIK3C2A and class II PI3Ks in health and disease.

Indexed as

MutationAdolescentAdultBone Diseases, DevelopmentalCataractChildCiliary Motility DisordersConsanguinityDwarfismFemaleFibroblastsHumansMalePedigreePhenotypePhosphatidylinositol 3-KinasesPhosphatidylinositol 3-KinasesPIK3C2A protein, human

Identifiers

PMID31034465
PMCPMC6508738
OpenAlexW2905248667

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.