Evidence map›Paper›PMID 31034218›Full record

ArticleJournal of the American Chemical Society2019

Substrate-Differentiated Transition States of SET7/9-Catalyzed Lysine Methylation.

Shi Chen, Kanishk Kapilashrami, Chamara Senevirathne, Zhen Wang, Junyi Wang, Joshua A Linscott, Minkui Luo

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Ghost authors revealed: The structure and function of human NWiley interdisciplinary reviews. RNA · 2023
    Review
  4. Article
  5. STUB1-SMYD2 Axis Regulates Drug Resistance in Glioma cells.Journal of molecular neuroscience : MN · 2022
    Article
  6. Total synthesis of nahuoic acid AChemical science · 2021
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kanishk Kapilashrami
Chamara Senevirathne
Zhen WangDepartment of Biochemistry , Albert Einstein College of Medicine , Bronx , New York 10461 , United States.
Junyi Wang
Joshua A LinscottProgram of Pharmacology, Weill Graduate School of Medical Science , Cornell University , New York , New York 10021 , United States.
Minkui LuoProgram of Pharmacology, Weill Graduate School of Medical Science , Cornell University , New York , New York 10021 , United States.ORCID 0000-0001-7409-7034
Memorial Sloan Kettering Cancer Center · USAlbert Einstein College of Medicine · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Proton Transfer Dynamics in Heme-Copper OxidasesP01GM068036 · NIGMS · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI CALLENDER, ROBERT · 2004 to 2018
$26.4M
CANCER PHARMACOLOGYT32CA062948 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LORRAINE J GUDAS · 1994 to 2026
$12.1M
Interrogating Protein Methyltransferases with Integrated ApproachesR35GM131858 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Minkui Luo · 2019 to 2026
$6.3M
Profile substrates and inhibitors of protein lysine methyltransferaseR01GM096056 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2011 to 2018
$3.2M
Interrogating Functions of Protein Methyltransferases with Chemical ToolsR01GM120570 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2016 to 2019
$1.8M
NCI NIH HHS P30 CA008748NCI NIH HHS T32 CA062948NIGMS NIH HHS P01 GM068036NIGMS NIH HHS R01 GM096056NIGMS NIH HHS R01 GM120570NIGMS NIH HHS R35 GM131858
6 · The paper itself

Abstract

Transition state stabilization is essential for rate acceleration of enzymatic reactions. Despite extensive studies on various transition state structures of enzymes, an intriguing puzzle is whether an enzyme can accommodate multiple transition states (TSs) to catalyze a chemical reaction. It is experimentally challenging to study this proposition in terms of the choices of suitable enzymes and the feasibility to distinguish multiple TSs. As a paradigm with the protein lysine methyltransferase (PKMT) SET7/9 paired with its physiological substrates H3 and p53, their TSs were solved with experimental kinetic isotope effects as computational constraints. Remarkably, SET7/9 adopts two structurally distinct TSs, a nearly symmetric S

Indexed as

CatalysisHistone-Lysine N-MethyltransferaseHistonesHumansKineticsLysineMethylationProtein BindingProtein ConformationProtein Processing, Post-TranslationalS-AdenosylmethionineTumor Suppressor Protein p53Histone-Lysine N-MethyltransferaseHistonesLysineS-AdenosylmethionineSETD7 protein, humanTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID31034218
PMCPMC6613214
OpenAlexW2943601145

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.