Evidence map›Paper›PMID 31033497›Full record

ArticleApplied immunohistochemistry & molecular morphology : AIMM

Expression of Indoleamine 2, 3-dioxygenase 1 (IDO1) and Tryptophanyl-tRNA Synthetase (WARS) in Gastric Cancer Molecular Subtypes.

Shaolei Lu, Li Juan Wang, Kara Lombardo, Yoonjin Kwak, Woo Ho Kim, Murray B Resnick

Open access · greenAbstract read
In one paragraph

Article in Applied immunohistochemistry & molecular morphology : AIMM. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 33 citations in OpenAlex.

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  18. Tryptophanyl-tRNA Synthetase as a Potential Therapeutic Target.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Shaolei LuDepartment of Pathology and Laboratory Medicine, Rhode Island Hospital and The Warren Alpert Medical School of Brown University, Providence, RI.
Li Juan WangDepartment of Pathology and Laboratory Medicine, Rhode Island Hospital and The Warren Alpert Medical School of Brown University, Providence, RI.
Kara LombardoDepartment of Pathology, Johns Hopkins School of Medicine, Baltimore, MD.
Yoonjin KwakDepartment of Pathology, Seoul National University Hospital.
Woo Ho KimDepartment of Pathology, Seoul National University College of Medicine, Seoul, Korea.
Murray B ResnickDepartment of Pathology and Laboratory Medicine, Rhode Island Hospital and The Warren Alpert Medical School of Brown University, Providence, RI.
Brown University · USJohns Hopkins Medicine · USSeoul National University · KRSeoul National University Hospital · KR

Funding

COBRE Center for Cancer Research DevelopmentP20GM103421 · NIGMS · RHODE ISLAND HOSPITAL · PI RAMRATNAM, BHARAT · 2012 to 2013
$4.5M
NIGMS NIH HHS P20 GM103421
6 · The paper itself

Abstract

aimsDevelopments in genomic pathology have led to novel molecular classification schemes in gastric cancers. Two of these new subtypes, Epstein-Barr virus (EBV)-associated and microsatellite instability-high (MSI-H), are associated with a dominant T-cell-mediated immune response. The roles of the immune modulators, indoleamine 2, 3-dioxygenase 1 (IDO1) and tryptophanyl-tRNA synthetase (WARS), have not been investigated in the context of this classification. METHODS AND

resultsUsing in situ hybridization and immunohistochemistry we subclassified 421 primary gastric adenocarcinomas into 5 subtypes, EBV-associated, epithelial to mesenchymal transition, MSI-H, p53-aberrant, and p53-wildtype tumors. Tumor-infiltrative lymphocytes were counted and protein expression of IDO1 and WARS was graded on tissue microarrays of these 421 tumors. High tumor-infiltrative lymphocytes as well as high expression of both IDO1 and WARS was found in EBV and MSI-H tumors. The prognostic effects of IDO1 and WARS expression were tumor subtype dependent. Although high expression levels of IDO1 and WARS were associated with poor prognosis in p53-aberrant, p53-wildtype, and all cancers combined, WARS expression was associated with better prognosis in MSI tumors.

conclusionsThe immunomodulators, IDO1 and WARs, are upregulated and have prognostic significance in EBV-associated and MSI-H tumors. Novel therapies targeting these proteins should be considered in the treatment of these patients.

Indexed as

AdenocarcinomaBiomarkers, TumorEpithelial-Mesenchymal TransitionEpstein-Barr Virus InfectionsFemaleHumansImmunohistochemistryIndoleamine-Pyrrole 2,3,-DioxygenaseIn Situ HybridizationKaplan-Meier EstimateLymphocytes, Tumor-InfiltratingMaleMicrosatellite InstabilityMiddle AgedNeoplasm StagingPrognosisBiomarkers, TumorIDO1 protein, humanIndoleamine-Pyrrole 2,3,-DioxygenaseTP53 protein, humanTryptophan-tRNA LigaseTumor Suppressor Protein p53

Identifiers

PMID31033497
PMCPMC6813876
OpenAlexW2941523078

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.