Evidence map›Paper›PMID 31031958›Full record

ArticleEcology and evolution2019

Ancient landscapes of the Namib Desert harbor high levels of genetic variability and deeply divergent lineages for Collembola.

Gemma E Collins, Ian D Hogg, Janine R Baxter, Gillian Maggs-Kölling, Don A Cowan

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Microbiomics of Namib Desert habitats.Extremophiles : life under extreme conditions · 2020
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Gemma E CollinsSchool of Science University of Waikato Hamilton New Zealand.ORCID https://orcid.org/0000-0002-3626-7845
Ian D HoggSchool of Science University of Waikato Hamilton New Zealand.ORCID https://orcid.org/0000-0002-6685-0089
Janine R BaxterCentre for Microbial Ecology and Genomics University of Pretoria Pretoria South Africa.
Gillian Maggs-KöllingGobabeb Research and Training Centre Walvis Bay Namibia.
Don A CowanCentre for Microbial Ecology and Genomics University of Pretoria Pretoria South Africa.ORCID https://orcid.org/0000-0001-8059-861X
University of Pretoria · ZAGobabeb Namib Research Institute · NANunavut Arctic College · CAUniversity of Waikato · NZ

Funding

UAB Research Center of Excellence in ArsenicalsU54ES030246 · NIEHS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ATHAR, MOHAMMAD · 2018 to 2022
$19.0M
NIEHS NIH HHS U54 ES030246
6 · The paper itself

Abstract

aimTo assess spatial patterns of genetic and species-level diversity for Namib Desert Collembola using mitochondrial DNA cytochrome LOCATION: Namib Desert gravel plains. TAXON: Collembola (springtails).

methodsA total of 77 soil samples were collected along NE-SW (60 km) and E-W (160 km) transects from within a 4,000 km

resultsWe obtained 341 successful COI sequences, 175 of which were unique haplotypes. GMYC analyses identified 30 putative species, with up to 28% sequence divergence (uncorrected p-distance). The distribution of genetic variants was disjunct, with 97% of haplotypes and 70% of "GMYC species" found only at single sites. MAIN

conclusionsDispersal events, although rare, may be facilitated by environmental events such as prevailing onshore winds or occasional flow of rainwater to the coast. We conclude that the high genetic diversity we observed is the result of ancient springtail lineages, patchy distribution of suitable habitats, and limited dispersal (gene flow) among habitable locations.

Indexed as

biogeographyCollembolagenetic diversityNamib Desert

Identifiers

PMID31031958
PMCPMC6476783
OpenAlexW2938956588

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.