Evidence map›Paper›PMID 31031930›Full record

ArticleEcology and evolution2019

One-locus-several-primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies.

Emmanuel Corse, Christelle Tougard, Gaït Archambaud-Suard, Jean-François Agnèse, Françoise D Messu Mandeng, Charles F Bilong Bilong, David Duneau, Lucie Zinger, Rémi Chappaz, Charles C Y Xu and 2 more

Abstract read
In one paragraph

Article in Ecology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  16. VTAM: A robust pipeline for validating metabarcoding data using controls.Computational and structural biotechnology journal · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Emmanuel CorseAix Marseille Univ, Avignon Univ CNRS, IRD, IMBE Marseille France.ORCID https://orcid.org/0000-0003-0992-726X
Christelle TougardISEM, CNRS, IRD, EPHE Université de Montpellier Montpellier France.
Gaït Archambaud-SuardIrstea, Aix Marseille Univ, RECOVER Aix-en-Provence France.
Jean-François AgnèseISEM, CNRS, IRD, EPHE Université de Montpellier Montpellier France.
Françoise D Messu MandengLaboratory of Parasitology and Ecology, Departement of Animal Biology and Physiology University of Yaoundé I Yaoundé Cameroon.
Charles F Bilong BilongLaboratory of Parasitology and Ecology, Departement of Animal Biology and Physiology University of Yaoundé I Yaoundé Cameroon.
David DuneauUniversité Toulouse 3 Paul Sabatier CNRS, ENSFEA, EDB (Laboratoire Évolution & Diversité Biologique) Toulouse France.
Lucie ZingerInstitut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM PSL Research University Paris France.
Rémi ChappazIrstea, Aix Marseille Univ, RECOVER Aix-en-Provence France.
Charles C Y XuRedpath Museum and Department of Biology McGill University Montréal Quebec Canada.
Emese MegléczAix Marseille Univ, Avignon Univ CNRS, IRD, IMBE Marseille France.
Vincent DubutAix Marseille Univ, Avignon Univ CNRS, IRD, IMBE Marseille France.ORCID https://orcid.org/0000-0002-5619-6909

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In diet metabarcoding analyses, insufficient taxonomic coverage of PCR primer sets generates false negatives that may dramatically distort biodiversity estimates. In this paper, we investigated the taxonomic coverage and complementarity of three cytochrome

Indexed as

cytochrome c oxidase subunit I genediet analysiseDNAfalse negativesmetabarcodingPCR primers

Identifiers

PMID31031930
PMCPMC6476781

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.