Evidence map›Paper›PMID 31031713›Full record

ArticleFrontiers in microbiology2019

Microbiota of the Gut-Lymph Node Axis: Depletion of Mucosa-Associated Segmented Filamentous Bacteria and Enrichment of

Benjamin Zwirzitz, Beate Pinior, Barbara Metzler-Zebeli, Monika Handler, Kristina Gense, Christian Knecht, Andrea Ladinig, Monika Dzieciol, Stefanie U Wetzels, Martin Wagner and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Benjamin ZwirzitzInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Beate PiniorInstitute for Veterinary Public Health, University of Veterinary Medicine, Vienna, Austria.
Barbara Metzler-ZebeliUniversity Clinic for Swine, University of Veterinary Medicine, Vienna, Austria.
Monika HandlerInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Kristina GenseInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Christian KnechtUniversity Clinic for Swine, University of Veterinary Medicine, Vienna, Austria.
Andrea LadinigUniversity Clinic for Swine, University of Veterinary Medicine, Vienna, Austria.
Monika DzieciolInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Stefanie U WetzelsInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Martin WagnerInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
Stephan Schmitz-EsserDepartment of Animal Science, Iowa State University, Ames, IA, United States.
Evelyne MannInstitute of Milk Hygiene, University of Veterinary Medicine, Vienna, Austria.
University of Veterinary Medicine Vienna · ATIowa State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms are translocated from the gut to lymphatic tissues via immune cells, thereby challenging and training the mammalian immune system. Antibiotics alter the gut microbiome and consecutively might also affect the corresponding translocation processes, resulting in an imbalanced state between the intestinal microbiota and the host. Hence, understanding the variant effects of antibiotics on the microbiome of gut-associated tissues is of vital importance for maintaining metabolic homeostasis and animal health. In the present study, we analyzed the microbiome of (i) pig feces, ileum, and ileocecal lymph nodes under the influence of antibiotics (Linco-Spectin and Colistin sulfate) using 16S rRNA gene sequencing for high-resolution community profiling and (ii) ileocecal lymph nodes in more detail with two additional methodological approaches, i.e., cultivation of ileocecal lymph node samples and (iii) metatranscriptome sequencing of a single lymph node sample. Supplementation of medicated feed showed a local effect on feces and ileal mucosa-associated microbiomes. Pigs that received antibiotics harbored significantly reduced amounts of segmented filamentous bacteria (SFB) along the ileal mucosa (

Indexed as

16S rRNA geneantibioticsgut microbiotaileumlymph nodesmetatranscriptomemicrobiomesegmented filamentous bacteria

Identifiers

PMID31031713
PMCPMC6470194
OpenAlexW2939625112

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.