Evidence map›Paper›PMID 31031182›Full record

ArticleMolecular metabolism2019

Epigenetic regulation of diabetogenic adipose morphology.

A G Kerr, I Sinha, S Dadvar, P Arner, I Dahlman

Open access · goldAbstract read
In one paragraph

Article in Molecular metabolism, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
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  12. Expression profiling of luminal B breast tumor in Indian women.Journal of cancer research and clinical oncology · 2023
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  13. Review
  14. Fasting influences aquaporin expression, water transport and adipocyte metabolism in the peritoneal membrane.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2023
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  15. Evidence of Flavonoids on Disease Prevention.Antioxidants (Basel, Switzerland) · 2023
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  19. The Combined Partial Knockdown ofAntioxidants (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

A G KerrDepartment of Medicine, Huddinge, Karolinska Institutet, Stockholm, Sweden.
I SinhaDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
S DadvarDepartment of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden.
P ArnerDepartment of Medicine, Huddinge, Karolinska Institutet, Stockholm, Sweden.
I DahlmanDepartment of Medicine, Huddinge, Karolinska Institutet, Stockholm, Sweden. Electronic address: ingrid.dahlman@ki.se.
Karolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveHypertrophic white adipose tissue (WAT) morphology is associated with insulin resistance and type 2 diabetes. The mechanisms governing hyperplastic versus hypertrophic WAT expansion are poorly understood. We assessed if epigenetic modifications in adipocytes are associated with hypertrophic adipose morphology. A subset of genes with differentially methylated CpG-sites (DMS) in the promoters was taken forward for functional evaluation.

methodsThe study included 126 women who underwent abdominal subcutaneous biopsy to determine adipose morphology. Global transcriptome profiling was performed on WAT from 113 of the women, and CpG methylome profiling on isolated adipocytes from 78 women. Small interfering RNAs (siRNA) knockdown in human mesenchymal stem cells (hMSCs) was used to assess influence of specific genes on lipid storage.

resultsA higher proportion of CpG-sites were methylated in hypertrophic compared to hyperplastic WAT. Methylation at 35,138 CpG-sites was found to correlate to adipose morphology. 2,102 of these CpG-sites were also differentially methylated in T2D; 98% showed directionally consistent change in methylation in WAT hypertrophy and T2D. We identified 2,508 DMS in 638 adipose morphology-associated genes where methylation correlated with gene expression. These genes were over-represented in gene sets relevant to WAT hypertrophy, such as insulin resistance, lipolysis, extracellular matrix organization, and innate immunity. siRNA knockdown of ADH1B, AZGP1, C14orf180, GYG2, HADH, PRKAR2B, PFKFB3, and AQP7 influenced lipid storage and metabolism.

conclusionCpG methylation could be influential in determining adipose morphology and thereby constitute a novel antidiabetic target. We identified C14orf180 as a novel regulator of adipocyte lipid storage and possibly differentiation.

Indexed as

AdipocytesAdipogenesisAdipokinesAdipose Tissue, WhiteAdiposityAdultAlcohol DehydrogenaseAquaporinsCarrier ProteinsCell DifferentiationCyclic AMP-Dependent Protein Kinase RIIbeta SubunitDiabetes Mellitus, Type 2DNA MethylationEpigenesis, GeneticFemaleGene Expression ProfilingADH1B protein, humanAdipokinesAlcohol DehydrogenaseAQP7 protein, humanAquaporinsAZGP1 protein, humanCarrier ProteinsCyclic AMP-Dependent Protein Kinase RIIbeta SubunitGlucosyltransferasesGlycoproteinsGYG2 protein, humanPFKFB3 protein, humanPhosphofructokinase-2PRKAR2B protein, humanRNA, Small InterferingZn-Alpha-2-GlycoproteinAdipocyteAdipogenesisEpigeneticsInsulin resistance

Identifiers

PMID31031182
PMCPMC6600120
OpenAlexW2936574499

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.