Evidence map›Paper›PMID 31029860›Full record

ArticleMetabolic engineering2019

Cyanobacterial carboxysome mutant analysis reveals the influence of enzyme compartmentalization on cellular metabolism and metabolic network rigidity.

Mary H Abernathy, Jeffrey J Czajka, Douglas K Allen, Nicholas C Hill, Jeffrey C Cameron, Yinjie J Tang

Open access · greenAbstract read
In one paragraph

Article in Metabolic engineering, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Architectural and biochemical advances in understanding microbial COThe Plant journal : for cell and molecular biology · 2026
    Review
  4. [COResearch square · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mary H AbernathyDepartment of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, MO 63130, USA.
Jeffrey J CzajkaDepartment of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, MO 63130, USA.
Douglas K AllenDonald Danforth Plant Science Center, St. Louis, MO 63132, USA; United States Department of Agriculture, Agricultural Research Service, St. Louis, MO 63132, USA.
Nicholas C HillDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Jeffrey C CameronDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA; Renewable and Sustainable Energy Institute, University of Colorado, Boulder, CO 80309, USA; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO 80401, USA. Electronic address: jeffrey.c.cameron@colorado.edu.
Yinjie J TangDepartment of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, MO 63130, USA. Electronic address: yinjie.tang@wustl.edu.
Washington University in St. Louis · USUniversity of Colorado Boulder · USDonald Danforth Plant Science Center · US

Funding

TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Predoctoral Training Program in Signaling and Cellular Regulation INCLUDE Down Syndrome SupplementT32GM142607 · NIGMS · UNIVERSITY OF COLORADO · PI Sabrina Leigh Spencer, Tin Tin Su · 2021 to 2026
$3.6M
NIGMS NIH HHS T32 GM008759NIGMS NIH HHS T32 GM142607
6 · The paper itself

Abstract

Cyanobacterial carboxysomes encapsulate carbonic anhydrase and ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO). Genetic deletion of the major structural proteins encoded within the ccm operon in Synechococcus sp. PCC 7002 (ΔccmKLMN) disrupts carboxysome formation and significantly affects cellular physiology. Here we employed both metabolite pool size analysis and isotopically nonstationary metabolic flux analysis (INST-MFA) to examine metabolic regulation in cells lacking carboxysomes. Under high CO

Indexed as

Bacterial ProteinsMetabolic Flux AnalysisMutationOperonRibulose-Bisphosphate CarboxylaseSynechococcusPhotosynthesisBacterial ProteinsRibulose-Bisphosphate CarboxylaseCompensatory responseINST-MFAMicrocompartmentMixotrophicPhotorespirationRuBisCO

Identifiers

PMID31029860
PMCPMC6800234
OpenAlexW2942191878

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.