Evidence map›Paper›PMID 31028562›Full record

ArticleJournal of medical systems2019

Automated diagnosis of celiac disease by video capsule endoscopy using DAISY Descriptors.

Jahmunah Vicnesh, Joel Koh En Wei, Edward J Ciaccio, Shu Lih Oh, Govind Bhagat, Suzanne K Lewis, Peter H Green, U Rajendra Acharya

Abstract read
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In one paragraph

Article in Journal of medical systems, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Jahmunah VicneshDepartment of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore, 599489, Singapore.
Joel Koh En WeiDepartment of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore, 599489, Singapore.
Edward J CiaccioDepartment of Medicine - Celiac Disease Center, Columbia University, New York, NY, USA.
Shu Lih OhDepartment of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore, 599489, Singapore.
Govind BhagatDepartment of Medicine - Celiac Disease Center, Columbia University, New York, NY, USA.
Suzanne K LewisDepartment of Medicine - Celiac Disease Center, Columbia University, New York, NY, USA.
Peter H GreenDepartment of Medicine - Celiac Disease Center, Columbia University, New York, NY, USA.
U Rajendra AcharyaDepartment of Electronics and Computer Engineering, Ngee Ann Polytechnic, Singapore, 599489, Singapore. aru@np.edu.sg.
Columbia University · USNgee Ann Polytechnic · SGTaylor's University · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Celiac disease is a genetically determined disorder of the small intestine, occurring due to an immune response to ingested gluten-containing food. The resulting damage to the small intestinal mucosa hampers nutrient absorption, and is characterized by diarrhea, abdominal pain, and a variety of extra-intestinal manifestations. Invasive and costly methods such as endoscopic biopsy are currently used to diagnose celiac disease. Detection of the disease by histopathologic analysis of biopsies can be challenging due to suboptimal sampling. Video capsule images were obtained from celiac patients and controls for comparison and classification. This study exploits the use of DAISY descriptors to project two-dimensional images onto one-dimensional vectors. Shannon entropy is then used to extract features, after which a particle swarm optimization algorithm coupled with normalization is employed to select the 30 best features for classification. Statistical measures of this paradigm were tabulated. The accuracy, positive predictive value, sensitivity and specificity obtained in distinguishing celiac versus control video capsule images were 89.82%, 89.17%, 94.35% and 83.20% respectively, using the 10-fold cross-validation technique. When employing manual methods rather than the automated means described in this study, technical limitations and inconclusive results may hamper diagnosis. Our findings suggest that the computer-aided detection system presented herein can render diagnostic information, and thus may provide clinicians with an important tool to validate a diagnosis of celiac disease.

Indexed as

AlgorithmsCapsule EndoscopyCeliac DiseaseHumansImage Processing, Computer-AssistedIntestinal MucosaSensitivity and SpecificityCeliac diseaseDaisy descriptors, PillCamNormalizationParticle swarm optimizationShannon entropy

Identifiers

PMID31028562
OpenAlexW2940605625

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.