Evidence map›Paper›PMID 31027917›Full record

ArticleEBioMedicine2019

Deciphering the complex interplay between microbiota, HPV, inflammation and cancer through cervicovaginal metabolic profiling.

Zehra Esra Ilhan, Paweł Łaniewski, Natalie Thomas, Denise J Roe, Dana M Chase, Melissa M Herbst-Kralovetz

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 190 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
190citing papers in PubMed, 3 pooled it
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

190 citing papers in PubMed, 3 syntheses or guidelines pooled it, 300 citations in OpenAlex.

  1. Systems analysis of the HPV-microbiome-biofilm triad.Frontiers in cellular and infection microbiology · 2026
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130 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zehra Esra IlhanDepartment of Obstetrics and Gynecology, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ 85004, USA.
Paweł ŁaniewskiDepartment of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ, 85004, USA.
Natalie ThomasDepartment of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ, 85004, USA.
Denise J RoeUA Cancer Center, University of Arizona, Tucson/Phoenix, AZ 85004, USA.
Dana M ChaseDepartment of Obstetrics and Gynecology, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ 85004, USA; UA Cancer Center, University of Arizona, Tucson/Phoenix, AZ 85004, USA; US Oncology, Phoenix, AZ 85016, USA; Maricopa Integrated Health Systems, Phoenix, AZ 85008, USA; Dignity Health St. Joseph's Hospital and Medical Center, Phoenix, AZ 85013, USA.
Melissa M Herbst-KralovetzDepartment of Obstetrics and Gynecology, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ 85004, USA; Department of Basic Medical Sciences, College of Medicine-Phoenix, University of Arizona, Phoenix, AZ, 85004, USA; UA Cancer Center, University of Arizona, Tucson/Phoenix, AZ 85004, USA. Electronic address: mherbst1@email.arizona.edu.
University of Arizona · USSt. Joseph's Hospital and Medical Center · US

Funding

Role of interleukin-36gamma in genital HSV-2 pathogenesisR15AI113457 · NIAID · UNIVERSITY OF ARIZONA · PI HERBST-KRALOVETZ, MELISSA MARIE · 2015 to 2015
$454k
NIAID NIH HHS R15 AI113457
6 · The paper itself

Abstract

backgroundDysbiotic vaginal microbiota have been implicated as contributors to persistent HPV-mediated cervical carcinogenesis and genital inflammation with mechanisms unknown. Given that cancer is a metabolic disease, metabolic profiling of the cervicovaginal microenvironment has the potential to reveal the functional interplay between the host and microbes in HPV persistence and progression to cancer.

methodsOur study design included HPV-negative/positive controls, women with low-grade and high-grade cervical dysplasia, or cervical cancer (n = 78). Metabolic fingerprints were profiled using liquid chromatography-mass spectrometry. Vaginal microbiota and genital inflammation were analysed using 16S rRNA gene sequencing and immunoassays, respectively. We used an integrative bioinformatic pipeline to reveal host and microbe contributions to the metabolome and to comprehensively assess the link between HPV, microbiota, inflammation and cervical disease.

findingsMetabolic analysis yielded 475 metabolites with known identities. Unique metabolic fingerprints discriminated patient groups from healthy controls. Three-hydroxybutyrate, eicosenoate, and oleate/vaccenate discriminated (with excellent capacity) between cancer patients versus the healthy participants. Sphingolipids, plasmalogens, and linoleate positively correlated with genital inflammation. Non-Lactobacillus dominant communities, particularly in high-grade dysplasia, perturbed amino acid and nucleotide metabolisms. Adenosine and cytosine correlated positively with Lactobacillus abundance and negatively with genital inflammation. Glycochenodeoxycholate and carnitine metabolisms connected non-Lactobacillus dominance to genital inflammation.

interpretationCervicovaginal metabolic profiles were driven by cancer followed by genital inflammation, HPV infection, and vaginal microbiota. This study provides evidence for metabolite-driven complex host-microbe interactions as hallmarks of cervical cancer with future translational potential. FUND: Flinn Foundation (#1974), Banner Foundation Obstetrics/Gynecology, and NIH NCI (P30-CA023074).

Indexed as

MetabolomeMicrobiotaAdultAmino AcidsComputational BiologyDisease SusceptibilityFemaleHumansLipid MetabolismMetabolomicsPapillomavirus InfectionsRNA, Ribosomal, 16SROC CurveUterine Cervical NeoplasmsVaginaVaginitisAmino AcidsRNA, Ribosomal, 16SXenobioticsAmino acid degradationCervical dysplasia and cancerGenital inflammationHost-microbe interactionsLactobacillus abundanceLipids and nucleotidesVaginal dysbiosis

Identifiers

PMID31027917
PMCPMC6604110
OpenAlexW2941842978

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.