Evidence map›Paper›PMID 31025940›Full record

ArticleeLife2019

Microsecond sub-domain motions and the folding and misfolding of the mouse prion protein.

Rama Reddy Goluguri, Sreemantee Sen, Jayant Udgaonkar

Abstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Rama Reddy GoluguriNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru, India.ORCID 0000-0003-1134-9841
Sreemantee SenNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru, India.
Jayant UdgaonkarNational Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru, India.ORCID 0000-0002-7005-224X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein aggregation appears to originate from partially unfolded conformations that are sampled through stochastic fluctuations of the native protein. It has been a challenge to characterize these fluctuations, under native like conditions. Here, the conformational dynamics of the full-length (23-231) mouse prion protein were studied under native conditions, using photoinduced electron transfer coupled to fluorescence correlation spectroscopy (PET-FCS). The slowest fluctuations could be associated with the folding of the unfolded state to an intermediate state, by the use of microsecond mixing experiments. The two faster fluctuations observed by PET-FCS, could be attributed to fluctuations within the native state ensemble. The addition of salt, which is known to initiate the aggregation of the protein, resulted in an enhancement in the time scale of fluctuations in the core of the protein. The results indicate the importance of native state dynamics in initiating the aggregation of proteins.

Indexed as

Protein FoldingAnimalsKineticsMicePrion ProteinsProtein ConformationSpectrum AnalysisPrion ProteinsPrnp protein, mousedry molten globulemicrosecond fluctuationsmicrosecond mixingmolecular biophysicsmouse prion proteinNative state dynamicsnonePET-FCSstructural biology

Identifiers

PMID31025940
PMCPMC6516828

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.