Evidence map›Paper›PMID 31025158›Full record

ArticleJournal of assisted reproduction and genetics2019

Compromised global embryonic transcriptome associated with advanced maternal age.

Blair R McCallie, Jason C Parks, G Devon Trahan, Kenneth L Jones, Breanne D Coate, Darren K Griffin, William B Schoolcraft, Mandy G Katz-Jaffe

Open access · hybridAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Blair R McCallieColorado Center for Reproductive Medicine, Lone Tree, CO, USA. bmccallie@fertilityresearch.org.ORCID http://orcid.org/0000-0002-6142-032X
Jason C ParksColorado Center for Reproductive Medicine, Lone Tree, CO, USA.
G Devon TrahanUniversity of Colorado, Anschutz Medical Campus, Aurora, CO, USA.
Kenneth L JonesUniversity of Colorado, Anschutz Medical Campus, Aurora, CO, USA.
Breanne D CoateOregon Reproductive Medicine, Portland, OR, USA.
Darren K GriffinUniversity of Kent, School of Biosciences, Canterbury, CT2 7NZ, UK.
William B SchoolcraftColorado Center for Reproductive Medicine, Lone Tree, CO, USA.
Mandy G Katz-JaffeColorado Center for Reproductive Medicine, Lone Tree, CO, USA.
University of Kent · GBColorado Center for Reproductive Medicine · USUniversity of Colorado Anschutz Medical Campus · USSeattle Reproductive Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo investigate the global transcriptome and associated embryonic molecular networks impacted with advanced maternal age (AMA).

methodsBlastocysts derived from donor oocyte IVF cycles with no male factor infertility (< 30 years of age) and AMA blastocysts (≥ 42 years) with no other significant female factor infertility or male factor infertility were collected with informed patient consent. RNA sequencing libraries were prepared using the SMARTer® Ultra® Low Kit (Clontech Laboratories) and sequenced on the Illumina HiSEQ 4000. Bioinformatics included Ingenuity® Pathway Analysis (Qiagen) with ViiA™ 7 qPCR utilized for gene expression validation (Applied Biosystems).

resultsA total of 2688 significant differentially expressed transcripts were identified to distinguish the AMA blastocysts from young, donor controls. 2551 (95%) of these displayed decreased transcription in the blastocysts from older women. Pathway analysis revealed three altered molecular signaling networks known to be critical for embryo and fetal development: CREBBP, ESR1, and SP1. Validation of genes within these networks confirmed the global decreased transcription observed in AMA blastocysts (P < 0.05).

conclusionsA significant, overall decreased global transcriptome was observed in blastocysts from AMA women. The ESR1/SP1/CREBBP pathway, in particular, was found to be a highly significant upstream regulator impacting biological processes that are vital during embryonic patterning and pre-implantation development. These results provide evidence that AMA embryos are compromised on a cell signaling level which can repress the embryo's ability to proliferate and implant, contributing to a deterioration of reproductive outcomes.

Indexed as

Gene Expression RegulationMaternal AgeTranscriptomeAdultBlastocystEmbryo ImplantationEmbryonic DevelopmentFemaleFertilization in VitroGene Expression ProfilingHumansInfertility, FemaleInfertility, MaleMaleAdvanced maternal ageGene expressionHuman blastocystTranscriptome

Identifiers

PMID31025158
PMCPMC6541584
OpenAlexW2942501466

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.