Evidence map›Paper›PMID 31024736›Full record

ArticleVirus evolution2019

Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017-18.

Marjolein J Poen, Divya Venkatesh, Theo M Bestebroer, Oanh Vuong, Rachel D Scheuer, Bas B Oude Munnink, Dennis de Meulder, Mathilde Richard, Thijs Kuiken, Marion P G Koopmans and 12 more

Abstract read
In one paragraph

Article in Virus evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Marjolein J PoenDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.ORCID 0000-0002-0390-3462
Divya VenkateshDepartment of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK.
Theo M BestebroerDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Oanh VuongDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Rachel D ScheuerDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Bas B Oude MunninkDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Dennis de MeulderDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Mathilde RichardDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Thijs KuikenDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Marion P G KoopmansDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Leon KelderStaatsbosbeheer, Amersfoort, the Netherlands.
Yong-Joo KimAvian Influenza Research and Diagnostic Division, Animal and Plant Quarantine Agency, Republic of Korea.
Youn-Jeong LeeAvian Influenza Research and Diagnostic Division, Animal and Plant Quarantine Agency, Republic of Korea.
Mieke SteenselsAvian Virology and Immunology, Sciensano, Brussels, Belgium.
Benedicte LambrechtAvian Virology and Immunology, Sciensano, Brussels, Belgium.
Adam DanVeterinary Diagnostics Directorate, Budapest, Hungary.
Anne PohlmannInstitute of Diagnostic Virology, Friedrich-Loeffler-Institut, Insel Riems, Germany.
Martin BeerInstitute of Diagnostic Virology, Friedrich-Loeffler-Institut, Insel Riems, Germany.
Vladimir SavicCroatian Veterinary Institute, Zagreb, Croatia.
Ian H BrownOIE/FAO/EURL International Reference Laboratory for Avian Influenza, Swine Influenza and Newcastle Disease, Animal and Plant Health Agency (APHA)-Weybridge, Addlestone, Surrey, UK.
Ron A M FouchierDepartment of Viroscience, Erasmus MC, Rotterdam, the Netherlands.
Nicola S LewisOIE/FAO/EURL International Reference Laboratory for Avian Influenza, Swine Influenza and Newcastle Disease, Animal and Plant Health Agency (APHA)-Weybridge, Addlestone, Surrey, UK.

Funding

NIAID NIH HHS HHSN272201400008C
6 · The paper itself

Abstract

Highly pathogenic avian influenza (HPAI) H5 clade 2.3.4.4 viruses were first introduced into Europe in late 2014 and re-introduced in late 2016, following detections in Asia and Russia. In contrast to the 2014-15 H5N8 wave, there was substantial local virus amplification in wild birds in Europe in 2016-17 and associated wild bird mortality, with evidence for occasional gene exchange with low pathogenic avian influenza (LPAI) viruses. Since December 2017, several European countries have again reported events or outbreaks with HPAI H5N6 reassortant viruses in both wild birds and poultry, respectively. Previous phylogenetic studies have shown that the two earliest incursions of HPAI H5N8 viruses originated in Southeast Asia and subsequently spread to Europe. In contrast, this study indicates that recent HPAI H5N6 viruses evolved from the H5N8 2016-17 viruses during 2017 by reassortment of a European HPAI H5N8 virus and wild host reservoir LPAI viruses. The genetic and phenotypic differences between these outbreaks and the continuing detections of HPAI viruses in Europe are a cause of concern for both animal and human health. The current co-circulation of potentially zoonotic HPAI and LPAI virus strains in Asia warrants the determination of drivers responsible for the global spread of Asian lineage viruses and the potential threat they pose to public health.

Indexed as

avian influenzaemerging diseasesH5N6highly pathogenic avian influenzaphylogenyvirology

Identifiers

PMID31024736
PMCPMC6476160

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.