Evidence map›Paper›PMID 31024170›Full record

ArticleCell research2019

Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate.

Rui Gao, Xingqun Liang, Sirisha Cheedipudi, Julio Cordero, Xue Jiang, Qingquan Zhang, Luca Caputo, Stefan Günther, Carsten Kuenne, Yonggang Ren and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Cell research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 107 citations in OpenAlex.

  1. Pooled it
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  9. They will be famous: Multipotent stem cells in breast milk.World journal of clinical pediatrics · 2025
    Review
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  19. Aging-Associated ALKBH5-mJournal of the American Heart Association · 2024
    Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 5 countries.

Rui GaoMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Xingqun LiangKey Laboratory of Arrhythmia, Ministry of Education, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
Sirisha CheedipudiMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Julio CorderoMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Xue JiangKey Laboratory of Arrhythmia, Ministry of Education, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
Qingquan ZhangKey Laboratory of Arrhythmia, Ministry of Education, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.ORCID http://orcid.org/0000-0002-2153-6491
Luca CaputoMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.ORCID http://orcid.org/0000-0002-1697-9968
Stefan GüntherMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Carsten KuenneMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Yonggang RenMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Shoumo BhattacharyaDepartment of Cardiovascular Medicine, University of Oxford, Oxford, UK.
Xuejun YuanMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Guillermo BarretoMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.ORCID http://orcid.org/0000-0002-7777-4712
Yihan ChenKey Laboratory of Arrhythmia, Ministry of Education, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
Thomas BraunMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany.
Sylvia M EvansDepartment of Medicine, Skaggs School of Pharmacy, University of California, San Diego, La Jolla, CA, 92093, USA. syevans@ucsd.edu.
Yunfu SunKey Laboratory of Arrhythmia, Ministry of Education, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China. yfsun@tongji.edu.cn.
Gergana DobrevaMax-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany. Gergana.Dobreva@medma.uni-heidelberg.de.ORCID http://orcid.org/0000-0002-4814-9416
Max Planck Institute for Heart and Lung Research · DETongji University · CNHeidelberg University · DEGoethe University Frankfurt · DEUniversity of California San Diego · USUniversity of Oxford · GB

Funding

Endocardial Pathways Regulated by Tbx20R01HL119967 · NHLBI · UNIVERSITY OF CHICAGO · PI EVANS, SYLVIA M, NOBREGA, MARCELO A. · 2014 to 2017
$2.2M
The Role of Dot1L in developing and postnatal heartR01HL123747 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI EVANS, SYLVIA M · 2014 to 2017
$1.5M
British Heart Foundation RG/10/17/28553NHLBI NIH HHS R01 HL119967NHLBI NIH HHS R01 HL123747
6 · The paper itself

Abstract

Generation of widely differing and specialized cell types from a single totipotent zygote involves large-scale transcriptional changes and chromatin reorganization. Pioneer transcription factors play key roles in programming the epigenome and facilitating recruitment of additional regulatory factors during successive cell lineage specification and differentiation steps. Here we show that Isl1 acts as a pioneer factor driving cardiomyocyte lineage commitment by shaping the chromatin landscape of cardiac progenitor cells. Using an Isl1 hypomorphic mouse line which shows congenital heart defects, genome-wide profiling of Isl1 binding together with RNA- and ATAC-sequencing of cardiac progenitor cells and their derivatives, we uncover a regulatory network downstream of Isl1 that orchestrates cardiogenesis. Mechanistically, we show that Isl1 binds to compacted chromatin and works in concert with the Brg1-Baf60c-based SWI/SNF complex to promote permissive cardiac lineage-specific alterations in the chromatin landscape not only of genes with critical functions in cardiac progenitor cells, but also of cardiomyocyte structural genes that are highly expressed when Isl1 itself is no longer present. Thus, the Isl1/Brg1-Baf60c complex plays a crucial role in orchestrating proper cardiogenesis and in establishing epigenetic memory of cardiomyocyte fate commitment.

Indexed as

AnimalsCell DifferentiationCells, CulturedEpigenesis, GeneticHEK293 CellsHumansLIM-Homeodomain ProteinsMagnetic Resonance ImagingMiceMice, KnockoutMice, TransgenicMyocytes, CardiacTranscription Factorsinsulin gene enhancer binding protein Isl-1LIM-Homeodomain ProteinsTranscription Factors

Identifiers

PMID31024170
PMCPMC6796926
OpenAlexW2941589195

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.