Evidence map›Paper›PMID 31022733›Full record

ArticleInvestigative ophthalmology & visual science2019

Optic Nerve Lipidomics Reveal Impaired Glucosylsphingosine Lipids Pathway in Glaucoma.

Muhammad Zain Chauhan, Ann-Katrin Valencia, Maria Carmen Piqueras, Mabel Enriquez-Algeciras, Sanjoy K Bhattacharya

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Pooled it
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  10. Ocular Treatments Targeting Separate Prostaglandin Receptors in Mice Exhibit Alterations in Intraocular Pressure and Optic Nerve Lipidome.Journal of ocular pharmacology and therapeutics : the official journal of the Association for Ocular Pharmacology and Therapeutics · 2023
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  14. Isobaric Incorporation of C13-Histidine for the Assessment of Remyelination.Methods in molecular biology (Clifton, N.J.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Muhammad Zain ChauhanDepartment of Ophthalmology & Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Ann-Katrin ValenciaDepartment of Ophthalmology & Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Maria Carmen PiquerasDepartment of Ophthalmology & Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Mabel Enriquez-AlgecirasDepartment of Ophthalmology & Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Sanjoy K BhattacharyaDepartment of Ophthalmology & Bascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
University of Miami · US

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Dmitry V Ivanov · 2004 to 2026
$12.2M
Novel Targets to Promote RGC Axon Regeneration: Insights from Unique RGC CohortsU01EY027257 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BHATTACHARYA, SANJOY K, LEMMON, VANCE P · 2016 to 2018
$2.0M
NEI NIH HHS P30 EY014801NEI NIH HHS U01 EY027257
6 · The paper itself

Abstract

Purpose: To determine major differences in lipid profile between human control and glaucomatous optic nerve. To assess major enzymes in lipid pathway if aberration is revealed for a lipid class by profiling. Methods: Optic nerve (ON) samples were obtained from human cadaveric donors [control (n = 11) and primary open-angle glaucoma (POAG; n = 12)]; the lipids were extracted using Bligh and Dyer methods. Control and glaucoma donors were all Caucasians age 72.3 ± 5.9 and 70.3 ± 10.5 (inclusive of both sexes), respectively. Lipids were extracted after weighing the tissue; the protein amounts in the corresponding aqueous phase of organic solvent extraction were recorded. High-resolution mass spectrometry was performed using a Q-exactive mass spectrometer coupled with an EASY-nLC 1000 liquid chromatograph instrument. Bioinformatics and statistical analysis were performed using LipidSearch v.4.1 and MetaboAnalyst 4.0/STATA 14.2. Protein amounts were determined using Bradford's method. Western blot, ELISA, and immunohistochemistry utilized established protocols and were performed for protein quantification and localization, respectively. Additional donor tissues were utilized for Western blot, ELISA, and immunohistochemistry. Results: Principal component analysis (PCA) placed control and glaucomatous ONs in two distinct groups based on analysis of lipid profiles. Total lipid, total phospholipids, total ceramide, and total sphingolipids were similar (without significant difference) between control and glaucoma. However, we found a significant increase in glucosylsphingosine in glaucoma compared to control samples. We found similar levels of glucocerebrosidase (GBA), ceramide glucosyltransferase (UGCG), decreased nonlysosomal glucocerebrosidase (GBA2), and increased lysosomal and nonlysosomal acylsphingosine amidohydrolase (ASAH1 and ASAH2) levels in glaucomatous ON compared to control. Conclusions: We found significant differences in glucosylsphingosine lipids, consistent with decreased GBA and GBA2 and increased ASAH1 and ASAH2 immunoreactivity in glaucoma, suggesting the potential impairment of sphingolipid enzymatic pathways in lysosomal and nonlysosomal cellular compartments.

Indexed as

Lipid MetabolismAcid CeramidaseAgedbeta-GlucosidaseBlotting, WesternChromatography, High Pressure LiquidEnzyme-Linked Immunosorbent AssayFemaleGlaucoma, Open-AngleGlucosylceramidaseGlucosyltransferasesHumansImmunohistochemistryLipidosesMaleMass SpectrometryAcid CeramidaseASAH1 protein, humanASAH2 protein, humanbeta-Glucosidaseceramide glucosyltransferaseGBA2 protein, humanGlucosylceramidaseGlucosyltransferasesNeutral CeramidasePsychosinesphingosyl beta-glucoside

Identifiers

PMID31022733
PMCPMC6485987
OpenAlexW2940532553

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.