Evidence map›Paper›PMID 31021596›Full record

ArticleACS chemical biology2019

Mitochondrial Protease ClpP is a Target for the Anticancer Compounds ONC201 and Related Analogues.

Paul R Graves, Lucas J Aponte-Collazo, Emily M J Fennell, Adam C Graves, Andrew E Hale, Nedyalka Dicheva, Laura E Herring, Thomas S K Gilbert, Michael P East, Ian M McDonald and 7 more

Erratum issuedAbstract read
In one paragraph

Article in ACS chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 123 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed, 1 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 1 synthesis or guideline pooled it, 197 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
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  5. Trial
  6. Review
  7. Elucidating the Molecular Impact of DA29-Induced ClpP Chemoactivation on Mitochondrial Function.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
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  14. Article
  15. Article
  16. Target identification and assessment in the era of AI.Nature reviews. Drug discovery · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. Molecular mechanisms of mitochondrial AAA+ proteases.The Journal of biological chemistry · 2026
    Review

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Paul R GravesDepartment of Radiation Oncology , New York Presbyterian Brooklyn Methodist Hospital , Brooklyn , New York 11215 , United States.
Lucas J Aponte-CollazoDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Emily M J FennellDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Adam C GravesDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Andrew E HaleDepartment of Microbiology and Immunology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Nedyalka DichevaDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Laura E HerringDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.ORCID 0000-0003-4496-7312
Thomas S K GilbertDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.ORCID 0000-0002-6833-6788
Michael P EastDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Ian M McDonaldDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Matthew R LockettDepartment of Chemistry and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.ORCID 0000-0003-4851-7757
Hani AshamallaDepartment of Radiation Oncology , New York Presbyterian Brooklyn Methodist Hospital , Brooklyn , New York 11215 , United States.
Nathaniel J MoormanDepartment of Microbiology and Immunology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.
Donald S KaranewskyMadera Therapeutics LLC , Chapel Hill , North Carolina 27517 , United States.
Edwin J IwanowiczMadera Therapeutics LLC , Chapel Hill , North Carolina 27517 , United States.
Ekhson HolmuhamedovInstitute of Theoretical and Experimental Biophysics, Russian Academy of Sciences , Pushchino 142292 , Russian Federation.
Lee M GravesDepartment of Pharmacology and the Lineberger Comprehensive Cancer Center , University of North Carolina at Chapel Hill , Chapel Hill , North Carolina 27599 , United States.ORCID 0000-0002-4736-9855
University of North Carolina at Chapel Hill · USMadera BioSciences (United States) · USNewYork–Presbyterian Brooklyn Methodist Hospital · USInstitute of Theoretical and Experimental Biophysics · RU

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
PREDOCTORAL TRAINING IN PHARMACOLOGICAL SCIST32GM007040 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NICHOLAS, ROBERT A · 1985 to 2019
$6.0M
Tumor Subtypes and Therapy Response in Pancreatic CancerR01CA199064 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TSAI, SUSAN, YEH, JEN JEN · 2016 to 2021
$4.4M
The role of host and viral translation factors during HCMV infectionR01AI103311 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MOORMAN, NATHANIEL J · 2013 to 2022
$3.9M
Elucidating the mechanism of action of novel ClpP activators in activation of the mitochondrial unfolded protein response.R01GM138520 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRAVES, LEE M · 2020 to 2023
$1.3M
NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA199064NIAID NIH HHS R01 AI103311NIGMS NIH HHS R01 GM138520NIGMS NIH HHS T32 GM007040
6 · The paper itself

Abstract

ONC201 is a first-in-class imipridone molecule currently in clinical trials for the treatment of multiple cancers. Despite enormous clinical potential, the mechanism of action is controversial. To investigate the mechanism of ONC201 and identify compounds with improved potency, we tested a series of novel ONC201 analogues (TR compounds) for effects on cell viability and stress responses in breast and other cancer models. The TR compounds were found to be ∼50-100 times more potent at inhibiting cell proliferation and inducing the integrated stress response protein ATF4 than ONC201. Using immobilized TR compounds, we identified the human mitochondrial caseinolytic protease P (ClpP) as a specific binding protein by mass spectrometry. Affinity chromatography/drug competition assays showed that the TR compounds bound ClpP with ∼10-fold higher affinity compared to ONC201. Importantly, we found that the peptidase activity of recombinant ClpP was strongly activated by ONC201 and the TR compounds in a dose- and time-dependent manner with the TR compounds displaying a ∼10-100 fold increase in potency over ONC201. Finally, siRNA knockdown of ClpP in SUM159 cells reduced the response to ONC201 and the TR compounds, including induction of CHOP, loss of the mitochondrial proteins (TFAM, TUFM), and the cytostatic effects of these compounds. Thus, we report that ClpP directly binds ONC201 and the related TR compounds and is an important biological target for this class of molecules. Moreover, these studies provide, for the first time, a biochemical basis for the difference in efficacy between ONC201 and the TR compounds.

Indexed as

Antineoplastic AgentsCell Line, TumorCell ProliferationChromatography, AffinityEndopeptidase ClpEnzyme ActivationGene Knockdown TechniquesHeterocyclic Compounds, 4 or More RingsHumansImidazolesMitochondriaPyridinesPyrimidinesAntineoplastic AgentsClpP protein, humanEndopeptidase ClpHeterocyclic Compounds, 4 or More RingsImidazolesPyridinesPyrimidinesTIC10 compound

Identifiers

PMID31021596
PMCPMC6528275
OpenAlexW2941632024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.