Evidence map›Paper›PMID 31021020›Full record

ArticleThe Plant journal : for cell and molecular biology2019

The highly divergent Jekyll genes, required for sexual reproduction, are lineage specific for the related grass tribes Triticeae and Bromeae.

Volodymyr Radchuk, Rajiv Sharma, Elena Potokina, Ruslana Radchuk, Diana Weier, Eberhard Munz, Miriam Schreiber, Martin Mascher, Nils Stein, Thomas Wicker and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 5 countries.

Volodymyr RadchukLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.ORCID 0000-0002-0472-6605
Rajiv SharmaLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Elena PotokinaLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Ruslana RadchukLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Diana WeierLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Eberhard MunzLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Miriam SchreiberThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.
Martin MascherLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.ORCID 0000-0001-6373-6013
Nils SteinLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.ORCID 0000-0003-3011-8731
Thomas WickerDepartment of Plant and Microbial Biology, University of Zürich, Zürich, Switzerland.
Benjamin KilianLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Ljudmilla BorisjukLeibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466, Gatersleben, Germany.
Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DEJames Hutton Institute · GBUniversity of Würzburg · DEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phylogenetically related groups of species contain lineage-specific genes that exhibit no sequence similarity to any genes outside the lineage. We describe here that the Jekyll gene, required for sexual reproduction, exists in two much diverged allelic variants, Jek1 and Jek3. Despite low similarity, the Jek1 and Jek3 proteins share identical signal peptides, conserved cysteine positions and direct repeats. The Jek1/Jek3 sequences are located at the same chromosomal locus and inherited in a monogenic Mendelian fashion. Jek3 has a similar expression as Jek1 and complements the Jek1 function in Jek1-deficient plants. Jek1 and Jek3 allelic variants were almost equally distributed in a collection of 485 wild and domesticated barley accessions. All domesticated barleys harboring the Jek1 allele belong to single haplotype J1-H1 indicating a genetic bottleneck during domestication. Domesticated barleys harboring the Jek3 allele consisted of three haplotypes. Jekyll-like sequences were found only in species of the closely related tribes Bromeae and Triticeae but not in other Poaceae. Non-invasive magnetic resonance imaging revealed intrinsic grain structure in Triticeae and Bromeae, associated with the Jekyll function. The emergence of Jekyll suggests its role in the separation of the Bromeae and Triticeae lineages within the Poaceae and identifies the Jekyll genes as lineage-specific.

Indexed as

Genetic VariationAllelesAmino Acid SequenceBiological EvolutionGeographyHaplotypesHordeumMagnetic Resonance ImagingMultigene FamilyPhylogenyPlant ProteinsPoaceaeReproductionSeedsSequence AlignmentSpecies SpecificityPlant Proteinsgene allelesgene family evolutionHordeum vulgarelineage-specific genesplant reproductionTriticeaeTriticum aestivum

Identifiers

PMID31021020
PMCPMC6851964
OpenAlexW2942476108

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.