Evidence map›Paper›PMID 31019434›Full record

ArticleHereditas2019

Transcriptome profiling of the fertile parent and sterile hybrid in tea plant flower buds.

Linbo Chen, Hao Qu, Lifei Xia, Yue Liu, Huibing Jiang, Yunnan Sun, Mingzhi Liang, Changjun Jiang

Open access · goldAbstract read
In one paragraph

Article in Hereditas, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Functional Analyses of Flavonol Synthase Genes FromFrontiers in plant science · 2021
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Linbo Chen *1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Hao Qu *1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Lifei Xia1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Yue Liu1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Huibing Jiang1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Yunnan Sun1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.
Mingzhi Liang1Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, 666201 China.ORCID 0000-0002-3451-5390
Changjun Jiang3State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, 230036 China.
Yunnan Academy of Agricultural Sciences · CNAnhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe tea plant is a crucial economic crop. The floral organ development consumes a large amount of nutrients, which affects the leaf yield. To understand the mechanism by which the tea plant produces sterile floral buds, we obtained a sterile tea plant by artificial hybridization. RNA-sequencing based transcriptome analysis was implemented in three samples to determine the differentially expressed genes (DEGs) related to flower development.

resultsIn this study, a total of 1991 DEGs were identified; 1057 genes were up-regulated and 934 genes were down-regulated in sterile hybrid floral buds. These were mainly distributed in the regulation of biological and metabolic processes. Significantly, auxin biosynthesis genes

conclusionThe transcriptome analysis suggested that the production of sterile floral buds is a complex bioprocess, and that low auxin-related gene levels result in the formation of sterile floral buds in the tea plant.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantGenes, PlantTranscriptomeComputational BiologyFlowersGene OntologyMolecular Sequence AnnotationPlant DevelopmentReproductionTeaTeaAuxinDifferentially expressed genesSterile floral budsTea plant

Identifiers

PMID31019434
PMCPMC6474060
OpenAlexW2946050060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.