Evidence map›Paper›PMID 31017953›Full record

ArticlePloS one2019

Characterization of pig saliva as the major natural habitat of Streptococcus suis by analyzing oral, fecal, vaginal, and environmental microbiota.

Kazunori Murase, Takayasu Watanabe, Sakura Arai, Hyunjung Kim, Mari Tohya, Kasumi Ishida-Kuroki, Tấn Hùng Võ, Thị Phương Bình Nguyễn, Ichiro Nakagawa, Ro Osawa and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 62 citations in OpenAlex.

  1. Oral Microbiome Characteristics in Patients With Autoimmune Hepatitis.Frontiers in cellular and infection microbiology · 2021
    Trial
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  3. AVeterinary sciences · 2026
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  4. Review
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  6. One health (Amsterdam, Netherlands) · 2025
    Review
  7. Article
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  10. Article
  11. Article
  12. Microbial genomics · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Role of Metabolic Adaptation ofPathogens (Basel, Switzerland) · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Kazunori MuraseDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Takayasu WatanabeResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.ORCID 0000-0001-5487-8191
Sakura AraiResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.
Hyunjung KimResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.
Mari TohyaResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.
Kasumi Ishida-KurokiResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.
Tấn Hùng VõVeterinary Diagnosis Laboratory, Faculty of Animal Science and Veterinary Medicine, Nong Lam University, Ho Chi Minh, Vietnam.
Thị Phương Bình NguyễnVeterinary Diagnosis Laboratory, Faculty of Animal Science and Veterinary Medicine, Nong Lam University, Ho Chi Minh, Vietnam.
Ichiro NakagawaDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Ro OsawaDepartment of Bioresource Sciences, Graduate School of Agricultural Sciences, Kobe University, Hyogo, Japan.
Ngọc Hải NguyễnVeterinary Diagnosis Laboratory, Faculty of Animal Science and Veterinary Medicine, Nong Lam University, Ho Chi Minh, Vietnam.
Tsutomu SekizakiResearch Center for Food Safety, Graduate School of Agricultural and Life Sciences, the University of Tokyo, Tokyo, Japan.
The University of Tokyo · JPNong Lam University Ho Chi Minh City · VNKyoto University · JPKobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is generally difficult to specify the sources of infection by which domestic animals may acquire pathogens. Through 16S rRNA gene amplicon sequencing, we compared the composition of microbiota in the saliva, vaginal mucus, and feces of pigs, and in swabs of feeder troughs and water dispensers collected from pig farms in Vietnam. The composition of the microbiota differed between samples in each sample group. Streptococcus, Actinobacillus, Moraxella, and Rothia were the most abundant genera and significantly discriminative in saliva samples, regardless of the plasticity and changeability of the composition of microbiota in saliva. Moreover, species assignment of the genus Streptococcus revealed that Streptococcus suis was exceptional in the salivary microbiota, due to being most abundant among the streptococcal species and sharing estimated proportions of 5.7%-9.4% of the total bacteria in saliva. Thus, pig oral microbiota showed unique characteristics in which the major species was the pig pathogen. On the other hand, β-diversity analysis showed that the microbiota in saliva was distinct from those in the others. From the above results, pig saliva was shown to be the major natural habitat of S. suis, and is suggested to be the most probable source of S. suis infection.

Indexed as

EcosystemMicrobiotaAnimalsBase SequenceBiodiversityFecesFemalePhylogenyRNA, Ribosomal, 16SSalivaSpecies SpecificityStreptococcus suisSwineVaginaRNA, Ribosomal, 16S

Identifiers

PMID31017953
PMCPMC6481863
OpenAlexW2942089746

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.