Evidence map›Paper›PMID 31016852›Full record

ArticleChembiochem : a European journal of chemical biology2019

Heavy Enzymes and the Rational Redesign of Protein Catalysts.

Alan F Scott, Louis Y-P Luk, Iñaki Tuñón, Vicent Moliner, Rudolf K Allemann

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Role of Protein Motions in Catalysis by Formate Dehydrogenase.The journal of physical chemistry. B · 2020
    Article
  4. Article
  5. Heavy Enzymes and the Rational Redesign of Protein Catalysts.Chembiochem : a European journal of chemical biology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Alan F ScottSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK.
Louis Y-P LukSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK.
Iñaki TuñónDepartament de Química Física, Universitat de Valencia, 46100, Burjassot, Spain.
Vicent MolinerDepartment of Physical and Analytical Chemistry, Universitat Jaume I, Avenida de Vicent Sos Baynat, s/n, 12071, Castellon, Spain.
Rudolf K AllemannSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK.ORCID 0000-0002-1323-8830
Cardiff University · GBUniversitat de València · ESUniversitat Jaume I · ES

Funding

Biotechnology and Biological Sciences Research Council BB/J005266/1Biotechnology and Biological Sciences Research Council BB/L020394/1Ministerio de Economía, Industria y Competitividad, Gobierno de España CTQ2015-74523-JINMinisterio de Economía y Competitividad CTQ2015-66223-C2Universitat Jaume I UJI·B2017-31
6 · The paper itself

Abstract

An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled "heavy" dihydrofolate reductases and their natural-abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present as hotspots for mutagenesis. Detailed understanding of the biophysics of enzyme catalysis based on insights gained from analysis of "heavy" enzymes might eventually allow routine engineering of enzymes to catalyse reactions of choice.

Indexed as

Alcohol DehydrogenaseBacteriaBiocatalysisCarbon IsotopesCatalytic DomainDeuteriumKineticsNitrogen IsotopesProtein EngineeringTetrahydrofolate DehydrogenaseAlcohol DehydrogenaseCarbon-13Carbon IsotopesDeuteriumNitrogen-15Nitrogen IsotopesTetrahydrofolate Dehydrogenasealcohol dehydrogenasesdihydrofolate reductasesenzyme engineeringisotope effectsmolecular dynamics

Identifiers

PMID31016852
PMCPMC6900096
OpenAlexW2941135277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.