Evidence map›Paper›PMID 31016661›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2019

Zebrafish as a Model to Study Cholestatic Liver Diseases.

Duc-Hung Pham, Chunyue Yin

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Update on Hepatobiliary Plasticity.Seminars in liver disease · 2023
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Duc-Hung PhamDivision of Gastroenterology, Hepatology and Nutrition, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Chunyue YinDivision of Gastroenterology, Hepatology and Nutrition, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA. chunyue.yin@cchmc.org.
Cincinnati Children's Hospital Medical Center · US

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2007 to 2026
$24.4M
Molecular targets in cholestasis caused by bile salt export pump deficiencyR01DK117266 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI YIN, CHUNYUE · 2018 to 2022
$1.7M
Regulation of hepatic stellate cells in development and alcoholic liver injuryR00AA020514 · NIAAA · CINCINNATI CHILDRENS HOSP MED CTR · PI YIN, CHUNYUE · 2014 to 2016
$722k
NIAAA NIH HHS R00 AA020514NIDDK NIH HHS P30 DK078392NIDDK NIH HHS R01 DK117266
6 · The paper itself

Abstract

Cholestasis is a condition that impairs bile flow, resulting in retention of bile fluid in the liver. It may cause significant morbidity and mortality due to pruritus, malnutrition, and complications from portal hypertension secondary to biliary cirrhosis. The zebrafish (Danio rerio) has emerged as a valuable model organism for studying cholestasis that complements with the in vitro systems and rodent models. Its main advantages include conserved mechanisms of liver development and bile formation, rapid external development, ease of monitoring hepatobiliary morphology and function in live larvae, and accessibility to genetic and chemical manipulations. In this chapter, we provide an overview of the existing zebrafish models of cholestatic liver diseases. We discuss the strengths and limitations of using zebrafish to study cholestasis. We also provide step-by-step descriptions of the methodologies for analyzing cholestatic phenotypes in zebrafish.

Indexed as

Disease Models, AnimalZebrafishAnimalsBile DuctsCholestasisLiverLiver DiseasesBile canaliculiBile ductBile salt transportersBODIPY fluorescent fatty acid analogCholangiocyteConfocal microscopyFluorescent bile acid derivativeHepatocyteTransmission electron microscopy

Identifiers

PMID31016661
PMCPMC6635761
OpenAlexW2941405186

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.