Evidence map›Paper›PMID 31015914›Full record

ArticleChemical science2019

Telomerase and poly(ADP-ribose) polymerase-1 activity sensing based on the high fluorescence selectivity and sensitivity of TOTO-1 towards G bases in single-stranded DNA and poly(ADP-ribose).

Haitang Yang, Fangjia Fu, Wei Li, Wei Wei, Yuanjian Zhang, Songqin Liu

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. TERT Genotype Polymorphism: A Glance of Change Egyptian MDS Outcomes.Asian Pacific journal of cancer prevention : APJCP · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Haitang YangJiangsu Engineering Laboratory of Smart Carbon-Rich Materials and Device , Jiangsu Province Hi-Tech Key Laboratory for Bio-medical Research , School of Chemistry and Chemical Engineering , Southeast University , Nanjing, 211189 , China . Email: weiw@seu.edu.cn ; Email: liusq@seu.edu.cn ; ; Tel: +86-25-52090613.
Fangjia FuInstitution of Theoretical and Computational Chemistry , School of Chemistry and Chemical Engineering , Nanjing University , Nanjing 210023 , People's Republic of China.
Wei LiInstitution of Theoretical and Computational Chemistry , School of Chemistry and Chemical Engineering , Nanjing University , Nanjing 210023 , People's Republic of China.ORCID 0000-0001-7801-3643
Wei WeiJiangsu Engineering Laboratory of Smart Carbon-Rich Materials and Device , Jiangsu Province Hi-Tech Key Laboratory for Bio-medical Research , School of Chemistry and Chemical Engineering , Southeast University , Nanjing, 211189 , China . Email: weiw@seu.edu.cn ; Email: liusq@seu.edu.cn ; ; Tel: +86-25-52090613.ORCID 0000-0003-1893-1105
Yuanjian ZhangJiangsu Engineering Laboratory of Smart Carbon-Rich Materials and Device , Jiangsu Province Hi-Tech Key Laboratory for Bio-medical Research , School of Chemistry and Chemical Engineering , Southeast University , Nanjing, 211189 , China . Email: weiw@seu.edu.cn ; Email: liusq@seu.edu.cn ; ; Tel: +86-25-52090613.ORCID 0000-0003-2932-4159
Songqin LiuJiangsu Engineering Laboratory of Smart Carbon-Rich Materials and Device , Jiangsu Province Hi-Tech Key Laboratory for Bio-medical Research , School of Chemistry and Chemical Engineering , Southeast University , Nanjing, 211189 , China . Email: weiw@seu.edu.cn ; Email: liusq@seu.edu.cn ; ; Tel: +86-25-52090613.ORCID 0000-0002-4686-5291
Bio-Medical Science (South Korea) · KRState Council of the People's Republic of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Telomerase and poly(ADP-ribose) polymerase-1 (PARP-1) are two potential cancer biomarkers and are closely related to tumor initiation and malignant progression. TOTO-1 is well-known for differentiating ss-DNA from ds-DNA because it is virtually non-fluorescent without DNA and exhibits very low fluorescence with ss-DNA, while it emits strong fluorescence with ds-DNA. In this paper, for the first time, it was found that TOTO-1 has high fluorescence selectivity and sensitivity towards the G bases in single-stranded DNA and poly(ADP-ribose) (PAR). Poly(dG) was used as the model target to explore its possible mechanism. Molecular dynamics (MD) simulation proved that intramolecular π-π stacking existed in TOTO-1 (in an aqueous solution), while intermolecular π-π stacking formed between TOTO-1 and poly(dG) in a similar way as that observed for dsDNA. Interestingly, telomerase and PARP-1 catalyzed the formation of G-rich DNA and PAR

Identifiers

PMID31015914
PMCPMC6461019
OpenAlexW2916546708

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.