Evidence map›Paper›PMID 31015472›Full record

ArticleNature communications2019

The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization.

Carlos Molina-Santiago, John R Pearson, Yurena Navarro, María Victoria Berlanga-Clavero, Andrés Mauricio Caraballo-Rodriguez, Daniel Petras, María Luisa García-Martín, Gaelle Lamon, Birgit Haberstein, Francisco M Cazorla and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. DietaryAntibiotics (Basel, Switzerland) · 2026
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  9. Biofilms: from the cradle of life to life support.NPJ biofilms and microbiomes · 2026
    Review
  10. Article
  11. Frontiers in plant science · 2026
    Article
  12. Review
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  14. Article
  15. Article
  16. Fast-growingbioRxiv : the preprint server for biology · 2025
    Article
  17. Bacteria Under Metal Stress-Molecular Mechanisms of Metal Tolerance.International journal of molecular sciences · 2025
    Review
  18. Article
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Carlos Molina-SantiagoInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain.ORCID http://orcid.org/0000-0002-1131-8917
John R PearsonNano-imaging Unit, Andalusian Centre for Nanomedicine and Biotechnology, BIONAND, 29071, Málaga, Spain.ORCID http://orcid.org/0000-0002-2267-0844
Yurena NavarroInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain.
María Victoria Berlanga-ClaveroInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain.ORCID http://orcid.org/0000-0002-2994-9688
Andrés Mauricio Caraballo-RodriguezUniversity of California San Diego, Collaborative Mass Spectrometry Innovation Center, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0001-5499-2728
Daniel PetrasUniversity of California San Diego, Collaborative Mass Spectrometry Innovation Center, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-6561-3022
María Luisa García-MartínNano-imaging Unit, Andalusian Centre for Nanomedicine and Biotechnology, BIONAND, 29071, Málaga, Spain.ORCID http://orcid.org/0000-0002-2257-7682
Gaelle LamonInstitute of Chemistry & Biology of Membranes & Nanoobjects (UMR5248 CBMN), CNRS, Université Bordeaux, Institut Européen de Chimie et Biologie, 33600, Pessac, France.
Birgit HabersteinInstitute of Chemistry & Biology of Membranes & Nanoobjects (UMR5248 CBMN), CNRS, Université Bordeaux, Institut Européen de Chimie et Biologie, 33600, Pessac, France.ORCID http://orcid.org/0000-0003-3723-9552
Francisco M CazorlaInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain.ORCID http://orcid.org/0000-0003-0798-0964
Antonio de VicenteInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain.ORCID http://orcid.org/0000-0003-2716-9861
Antoine LoquetInstitute of Chemistry & Biology of Membranes & Nanoobjects (UMR5248 CBMN), CNRS, Université Bordeaux, Institut Européen de Chimie et Biologie, 33600, Pessac, France.ORCID http://orcid.org/0000-0001-7176-7813
Pieter C DorresteinUniversity of California San Diego, Collaborative Mass Spectrometry Innovation Center, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-3003-1030
Diego RomeroInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Microbiología, Universidad de Málaga, Bulevar Louis Pasteur 31 (Campus Universitario de Teatinos), 29071, Málaga, Spain. diego_romero@uma.es.ORCID http://orcid.org/0000-0002-2052-6515

Funding

TrainingP41GM103484 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PEVZNER, PAVEL A · 2012 to 2018
$8.7M
Synapt ion mobility mass spectrometerS10RR029121 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DORRESTEIN, PIETER C · 2011 to 2011
$802k
EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) BacBio 637971Ministerio de Economía y Competitividad (Ministry of Economy and Competitiveness) AGL2016-78662-RNCRR NIH HHS S10 RR029121NIGMS NIH HHS P41 GM103484
6 · The paper itself

Abstract

Bacteria of the genera Pseudomonas and Bacillus can promote plant growth and protect plants from pathogens. However, the interactions between these plant-beneficial bacteria are understudied. Here, we explore the interaction between Bacillus subtilis 3610 and Pseudomonas chlororaphis PCL1606. We show that the extracellular matrix protects B. subtilis colonies from infiltration by P. chlororaphis. The absence of extracellular matrix results in increased fluidity and loss of structure of the B. subtilis colony. The P. chlororaphis type VI secretion system (T6SS) is activated upon contact with B. subtilis cells, and stimulates B. subtilis sporulation. Furthermore, we find that B. subtilis sporulation observed prior to direct contact with P. chlororaphis is mediated by histidine kinases KinA and KinB. Finally, we demonstrate the importance of the extracellular matrix and the T6SS in modulating the coexistence of the two species on melon plant leaves and seeds.

Indexed as

Gene Expression Regulation, BacterialBacillus subtilisBacterial ProteinsColony Count, MicrobialCucurbitaceaeExtracellular MatrixMicrobial InteractionsPhosphotransferasesPlant LeavesProtein KinasesPseudomonas chlororaphisSeedsSpores, BacterialSymbiosisType VI Secretion SystemsBacterial ProteinskinA protein, Bacillus subtiliskinB protein, Bacillus subtilisPhosphotransferasesProtein KinasesType VI Secretion Systems

Identifiers

PMID31015472
PMCPMC6478825

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.