ArticleBMC bioinformatics2019
Estimates of introgression as a function of pairwise distances.
Article in BMC bioinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed, 35 citations in OpenAlex.
- A supergene and genomic mosaicism are associated with phenotypic evolution in Galápagos tree finches.Nature communications · 2026Article
- Incomplete lineage sorting shaped mixed traits during a colobine primate radiation.Proceedings of the National Academy of Sciences of the United States of America · 2026Article
- Recent advances in methods to characterize archaic introgression in modern humans.Genome research · 2026Review
- Parallel and non-parallel features of adaptive radiation in Yucatán pupfishes.bioRxiv : the preprint server for biology · 2025Article
- Identifying sets of phylogenetically informative markers for Anastrepha (Diptera: Tephritidae).Scientific reports · 2025Article
- Adaptive Introgression as an Evolutionary Force: A Meta-Analysis of Knowledge Trends.Evolutionary applications · 2025Article
- Pan-Genome Analysis Reveals Local Adaptation to Climate Driven by Introgression in Oak Species.Molecular biology and evolution · 2025Article
- Detection and quantification of introgression using Bayesian inference based on conjugate priors.Bioinformatics (Oxford, England) · 2024Article
- Inference of Locus-Specific Population Mixtures from Linked Genome-Wide Allele Frequencies.Molecular biology and evolution · 2024Article
- The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars.Nature genetics · 2024Article
- Comparative genomic analyses provide new insights into evolutionary history and conservation genomics of gorillas.BMC ecology and evolution · 2024Review
- Leveraging shared ancestral variation to detect local introgression.PLoS genetics · 2024Article
- Strong postmating reproductive isolation in Mimulus section Eunanus.Journal of evolutionary biology · 2023Article
- Evidence for a single, ancient origin of a genus-wide alternative life history strategy.Science advances · 2023Article
- A need for standardized reporting of introgression: Insights from studies across eukaryotes.Evolution letters · 2022Article
- Rapid adaptive radiation of Darwin's finches depends on ancestral genetic modules.Science advances · 2022Article
- Article
- Review
- Consequences of introgression and gene flow on the genetic structure and diversity of Lima bean (PeerJ · 2022Article
- Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus tremula L.).Molecular biology and evolution · 2021Article
Corrections and comments
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Authors and funding
2 authors at 2 institutions in 2 countries.
Funding
Abstract
backgroundResearch over the last 10 years highlights the increasing importance of hybridization between species as a major force structuring the evolution of genomes and potentially providing raw material for adaptation by natural and/or sexual selection. Fueled by research in a few model systems where phenotypic hybrids are easily identified, research into hybridization and introgression (the flow of genes between species) has exploded with the advent of whole-genome sequencing and emerging methods to detect the signature of hybridization at the whole-genome or chromosome level. Amongst these are a general class of methods that utilize patterns of single-nucleotide polymorphisms (SNPs) across a tree as markers of hybridization. These methods have been applied to a variety of genomic systems ranging from butterflies to Neanderthals to detect introgression, however, when employed at a fine genomic scale these methods do not perform well to quantify introgression in small sample windows.
resultsWe introduce a novel method to detect introgression by combining two widely used statistics: pairwise nucleotide diversity d
conclusionWe present a new distance based statistic d
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.