ArticleProceedings. Biological sciences2019
A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans.
Article in Proceedings. Biological sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
57 citing papers in PubMed.
- On Shell Closure and Beyond: Classification and Functional Interpretation of Chela Types in Paguroidea (Decapoda).Journal of morphology · 2026Article
- A High-quality Reference Genome and Tissue Expression Atlas for the European Lobster (Homarus gammarus).Genome biology and evolution · 2026Article
- Gene Rearrangement in the Mitochondrial Genomes of the Sand Crabs Albunea symmysta (Anomura:Hippoidea) with Insights into Phylogenetic Relationships in the Anomura (Crustacea: Decapoda).Biochemical genetics · 2026Article
- Article
- The extraordinary satellitome diversity of freshwater crayfish: a driver of genome evolution.Mobile DNA · 2026Article
- The dynamic evolution of panarthropod germ cell specification mechanisms.Development (Cambridge, England) · 2026Review
- Conserved Gene Order and Adaptive Evolution in Mitochondrial Genomes ofEcology and evolution · 2026Article
- Imagin: An Integrase-Like Gene Conserved Across Malacostracan Crustaceans Derived From a Ginger1 DNA Transposon.Genome biology and evolution · 2026Article
- Reduction of body segmentation in the skeleton shrimp Caprella scaura (Amphipoda: Caprellidae) inferred from comparative internal anatomy of Caprelloidea.Die Naturwissenschaften · 2026Article
- The sensory gene repertoire of deep-sea hydrothermal shrimp.PloS one · 2026Article
- Based on Mitochondrial Genomes and Gene Order Rearrangements: Phylogenetic Relationships and Terrestrial Adaptability in Paguroidea (Crustacea: Decapoda).Ecology and evolution · 2025Article
- Integrative phylogenomics sheds light on the diversity and evolution of fluorescence in coral-dwelling gall crabs.Proceedings. Biological sciences · 2025Article
- The chromosome-level genome provides insights into the adaptive evolution of the visual system in Oratosquilla oratoria.BMC biology · 2025Article
- Transcriptome sequencing reveals the evolutionary histories and gene expression evolution in two related Pagurus species.PloS one · 2025Article
- Review
- Article
- Unraveling the Complete Mitochondrial Genome ofEcology and evolution · 2024Article
- Genome sequencing of3 Biotech · 2024Article
- Phylogenomics supports a single origin of terrestriality in isopods.Proceedings. Biological sciences · 2024Article
- Genome assembly of redclaw crayfish (Cherax quadricarinatus) provides insights into its immune adaptation and hypoxia tolerance.BMC genomics · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Comprising over 15 000 living species, decapods (crabs, shrimp and lobsters) are the most instantly recognizable crustaceans, representing a considerable global food source. Although decapod systematics have received much study, limitations of morphological and Sanger sequence data have yet to produce a consensus for higher-level relationships. Here, we introduce a new anchored hybrid enrichment kit for decapod phylogenetics designed from genomic and transcriptomic sequences that we used to capture new high-throughput sequence data from 94 species, including 58 of 179 extant decapod families, and 11 of 12 major lineages. The enrichment kit yields 410 loci (greater than 86 000 bp) conserved across all lineages of Decapoda, more clade-specific molecular data than any prior study. Phylogenomic analyses recover a robust decapod tree of life strongly supporting the monophyly of all infraorders, and monophyly of each of the reptant, 'lobster' and 'crab' groups, with some results supporting pleocyemate monophyly. We show that crown decapods diverged in the Late Ordovician and most crown lineages diverged in the Triassic-Jurassic, highlighting a cryptic Palaeozoic history, and post-extinction diversification. New insights into decapod relationships provide a phylogenomic window into morphology and behaviour, and a basis to rapidly and cheaply expand sampling in this economically and ecologically significant invertebrate clade.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.