Evidence map›Paper›PMID 31014039›Full record

ArticleViruses2019

Dynamics of Bacterial and Viral Communities in Paddy Soil with Irrigation and Urea Application.

Yuting Li, Hao Sun, Weichao Yang, Guanxiong Chen, Hui Xu

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yuting LiInstitute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China. liyuting211@mails.ucas.ac.cn.
Hao SunInstitute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China. haos@spaces.ac.cn.
Weichao YangInstitute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China. yangweichao@iae.ac.cn.
Guanxiong ChenInstitute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China. gxchen39@iae.ac.cn.
Hui XuInstitute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China. xuhui@iae.ac.cn.
Chinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses are ubiquitous in natural systems. By influencing bacterial abundance (BA) and community structure through lysis-lysogenic conversion, viruses are involved in various ecological processes. In agricultural management, nitrogen addition and irrigation should be considered as important factors that can modify soil viral dynamics but have been ignored. In our study, short-term dynamics of autochthonous soil viral and bacterial abundance and diversity after irrigation and urea application were examined in a long-term experimental paddy field. Urea addition delayed the emergence of peak viral abundance for three days, suggesting that viruses are sensitive to N addition. Under short-term eutrophic conditions through urea application, viruses undertake a lysogenic-biased strategy. Moreover, nitrogen-fixing bacteria were most likely specifically lysed in urea-treated soil, which suggests that soil viruses block N accumulation by killing nitrogen-fixing bacteria. To the best of our knowledge, this study is the first to investigate dynamic changes in autochthonous viruses in paddy fields.

Indexed as

Agricultural IrrigationBacterial Physiological PhenomenaSoil MicrobiologyVirus Physiological PhenomenaAgricultureBacteriaChinaNitrogenOryzaRNA, Ribosomal, 16SSoilUreaVirusesNitrogenRNA, Ribosomal, 16SSoilUreapaddy soilsoil bacteriasoil nutrient cyclingsoil virusviral regulationviromes

Identifiers

PMID31014039
PMCPMC6520780
OpenAlexW2938799305

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.