Evidence map›Paper›PMID 31013581›Full record

ArticleInternational journal of molecular sciences2019

The Effects of Epigallocatechin Gallate (EGCG) on Pulmonary Fibroblasts of Idiopathic Pulmonary Fibrosis (IPF)-A Next-Generation Sequencing and Bioinformatic Approach.

Ming-Ju Tsai, Wei-An Chang, Ssu-Hui Liao, Kuo-Feng Chang, Chau-Chyun Sheu, Po-Lin Kuo

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Dual action of epigallocatechin-3-gallate in virus-induced cell Injury.Journal, genetic engineering & biotechnology · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Fibropreventive and Antifibrotic Effects of Uncaria gambir on Rats with Pulmonary Fibrosis.Evidence-based complementary and alternative medicine : eCAM · 2022
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ming-Ju TsaiGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan. SiegfriedTsai@gmail.com.ORCID 0000-0003-3621-3334
Wei-An ChangGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan. 960215kmuh@gmail.com.
Ssu-Hui LiaoGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan. s0970215575@gmail.com.
Kuo-Feng ChangWelgene Biotech, Inc., Taipei 115, Taiwan. nickchang@welgene.com.tw.
Chau-Chyun SheuGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan. sheucc@gmail.com.ORCID 0000-0002-7979-3749
Po-Lin KuoGraduate Institute of Clinical Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung 807, Taiwan. kuopolin@seed.net.tw.ORCID 0000-0003-2487-2818
Kaohsiung Medical University · TW

Funding

Kaohsiung Medical University KMU-DK108003Kaohsiung Medical University KMU-Q108005Kaohsiung Medical University Chung-Ho Memorial Hospital KMUH106-6T05Kaohsiung Medical University Chung-Ho Memorial Hospital KMUH1070-7M07Kaohsiung Medical University Chung-Ho Memorial Hospital KMUH107-7M06Kaohsiung Medical University Chung-Ho Memorial Hospital KMUH107-7R14Kaohsiung Medical University Chung-Ho Memorial Hospital KMUHS10701Kaohsiung Medical University Chung-Ho Memorial Hospital KMUHS10712Ministry of Science and Technology, Taiwan MOST 106-2314-B-037-016-MY2Ministry of Science and Technology, Taiwan MOST 107-2320-B-037-011-MY3
6 · The paper itself

Abstract

Idiopathic pulmonary fibrosis (IPF) is a disabling and lethal chronic progressive pulmonary disease. Epigallocatechin gallate (EGCG) is a polyphenol, which is the major biological component of green tea. The anti-oxidative, anti-inflammatory, and anti-fibrotic effects of EGCG have been shown in some studies, whereas its effects in altering gene expression in pulmonary fibroblasts have not been systematically investigated. This study aimed to explore the effect of EGCG on gene expression profiles in fibroblasts of IPF. The pulmonary fibroblasts from an IPF patient were treated with either EGCG or water, and the expression profiles of mRNAs and microRNAs were determined by next-generation sequencing (NGS) and analyzed with the bioinformatics approach. A total of 61 differentially expressed genes and 56 differentially expressed microRNAs were found in EGCG-treated IPF fibroblasts. Gene ontology analyses revealed that the differentially expressed genes were mainly involved in the biosynthetic and metabolic processes of cholesterol. In addition, five potential altered microRNA-mRNA interactions were found, including hsa-miR-939-5p-

Indexed as

BiomarkersCatechinComputational BiologyFibroblastsGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHigh-Throughput Nucleotide SequencingHumansIdiopathic Pulmonary FibrosisMicroRNAsTranscriptomeBiomarkersCatechinepigallocatechin gallateMicroRNAsbioinformaticsEGCGepigallocatechin gallatefibroblastnext-generation sequencingPCSK9

Identifiers

PMID31013581
PMCPMC6514693
OpenAlexW2936916919

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.