Evidence map›Paper›PMID 31012266›Full record

ArticleMicrobial biotechnology2019

Functional assessment of hydrophilic domains of late embryogenesis abundant proteins from distant organisms.

Yingying Liu, Heng Zhang, Jiahui Han, Shijie Jiang, Xiuxiu Geng, Dong Xue, Yun Chen, Chen Zhang, Zhengfu Zhou, Wei Zhang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Pleiotropic roles of late embryogenesis abundant proteins ofComputational and structural biotechnology journal · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Yingying LiuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Heng ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Jiahui HanBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Shijie JiangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Xiuxiu GengBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Dong XueBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yun ChenBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Chen ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zhengfu ZhouBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Wei ZhangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Ming ChenBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Min LinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Jin WangBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID 0000-0002-8810-8862
Chinese Academy of Agricultural Sciences · CNSouthwest University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Late embryogenesis abundant (LEA) proteins play a protective role during desiccation and oxidation stresses. LEA3 proteins are a major group characterized by a hydrophilic domain (HD) with a highly conserved repeating 11-amino acid motif. We compared four different HD orthologs from distant organisms: (i) DrHD from the extremophilic bacterium Deinococcus radiodurans; (ii) CeHD from the nematode Caenorhabditis elegans; (iii) YlHD from the yeast Yarrowia lipolytica; and (iv) BnHD from the plant Brassica napus. Circular dichroism spectroscopy showed that all four HDs were intrinsically disordered in phosphate buffer and then folded into α-helical structures with the addition of glycerol or trifluoroethanol. Heterologous HD expression conferred enhanced desiccation and oxidation tolerance to Escherichia coli. These four HDs protected the enzymatic activities of lactate dehydrogenase (LDH) by preventing its aggregation under desiccation stress. The HDs also interacted with LDH, which was intensified by the addition of hydrogen peroxide (H

Indexed as

AnimalsBacterial ProteinsBrassica napusCaenorhabditis elegansCaenorhabditis elegans ProteinsCircular DichroismCloning, MolecularDehydrationDeinococcusEscherichia coliFungal ProteinsGene ExpressionMicrobial ViabilityOxidative StressPlant ProteinsProtein ConformationBacterial ProteinsCaenorhabditis elegans ProteinsFungal Proteinslate embryogenesis abundant protein, plantPlant Proteins

Identifiers

PMID31012266
PMCPMC6559209
OpenAlexW2941901392

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.