Evidence map›Paper›PMID 31010837›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2019

Novel RB1-Loss Transcriptomic Signature Is Associated with Poor Clinical Outcomes across Cancer Types.

William S Chen, Mohammed Alshalalfa, Shuang G Zhao, Yang Liu, Brandon A Mahal, David A Quigley, Ting Wei, Elai Davicioni, Timothy R Rebbeck, Philip W Kantoff and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 58 citations in OpenAlex.

  1. Trial
  2. Trial
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  4. Review
  5. Article
  6. Synthetic lethality between RB-loss and E2F3 inhibition in small cell cancers targeted by pyrimidine synthesis blockade.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Proteogenomic discovery ofScience advances · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Concurrent RB1 Loss and BRCA Deficiency Predicts Enhanced Immunologic Response and Long-term Survival in Tubo-ovarian High-grade Serous Carcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Concurrent RB1 loss andmedRxiv : the preprint server for health sciences · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 2 countries.

William S Chen *Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Mohammed Alshalalfa *Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Shuang G ZhaoDepartment of Radiation Oncology, University of Michigan, Ann Arbor, Michigan.
Yang LiuGenomeDx Biosciences, Vancouver, British Columbia, Canada.
Brandon A MahalDana-Farber Cancer Institute and Brigham and Women's Hospital, Boston, Massachusetts.
David A QuigleyHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Ting WeiHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Elai DavicioniGenomeDx Biosciences, Vancouver, British Columbia, Canada.ORCID https://orcid.org/0000-0001-9136-099X
Timothy R RebbeckDepartment of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts.
Philip W KantoffDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York.
Christopher A MaherMcDonnell Genome Institute, Washington University in St. Louis, St. Louis, Missouri.
Karen E KnudsenDepartments of Cancer Biology and Medical Oncology, Thomas Jefferson University, Philadelphia, Pennsylvania.
Eric J SmallHelen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.
Paul L Nguyen *Dana-Farber Cancer Institute and Brigham and Women's Hospital, Boston, Massachusetts.
Felix Y Feng *Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California. felix.feng@ucsf.edu.
Dana-Farber Brigham Cancer Center · USGenome British Columbia · CAUCSF Helen Diller Family Comprehensive Cancer Center · USUniversity of California, San Francisco · USHarvard University · USJames S. McDonnell Foundation · USMemorial Sloan Kettering Cancer Center · USThomas Jefferson University · USUniversity of Michigan · USUniversity of New Haven · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Biomarker Approaches to Individualizing Systemic Therapy for High Risk Prostate CancerR01CA240582 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FENG, FELIX YI-CHUNG, NGUYEN, PAUL L · 2020 to 2024
$3.4M
Role of PITX1 regulatory mutations in morphological variation and human lower limb abnormalitiesF31AR068870 · NIAMS · STANFORD UNIVERSITY · PI THOMPSON, ABBEY CAROLYN · 2015 to 2017
$78k
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA240582NIAMS NIH HHS F31 AR068870
6 · The paper itself

Abstract

purposeRb-pathway disruption is of great clinical interest, as it has been shown to predict outcomes in multiple cancers. We sought to develop a transcriptomic signature for detecting biallelic EXPERIMENTAL

designWe utilized data from the Cancer Cell Line Encyclopedia (

resultsRBS outperformed the leading existing signature for detecting

conclusionsOur study provides the first validated tool to assess

Indexed as

NeoplasmsTranscriptomeBiomarkers, TumorDisease ProgressionHumansMalePrognosisBiomarkers, Tumor

Identifiers

PMID31010837
PMCPMC7883384
OpenAlexW2942128858

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.