Evidence map›Paper›PMID 31006977›Full record

ArticleMicrobial biotechnology2020

Generation of a highly attenuated strain of Pseudomonas aeruginosa for commercial production of alginate.

Meagan E Valentine, Brandon D Kirby, Thomas R Withers, Shannon L Johnson, Timothy E Long, Youai Hao, Joseph S Lam, Richard M Niles, Hongwei D Yu

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 69 citations in OpenAlex.

  1. Alginate Biosynthesis ofFood science & nutrition · 2026
    Article
  2. Review
  3. Review
  4. Review
  5. Applying a polysaccharide lyase fromApplied and environmental microbiology · 2025
    Article
  6. Review
  7. Genome analysis of Pseudomonas strain 4B with broad antagonistic activity against toxigenic fungi.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. The two faces of pyocyanin - why and how to steer its production?World journal of microbiology & biotechnology · 2023
    Review
  13. Article
  14. Cold adaptedFrontiers in microbiology · 2023
    Review
  15. Article
  16. Detection ofInternational journal of microbiology · 2022
    Article
  17. The Layered Encapsulation of Vitamin BFoods (Basel, Switzerland) · 2021
    Article
  18. Article
  19. Single-Cell Microgels for Diagnostics and Therapeutics.Advanced functional materials · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Meagan E ValentineRobert C. Byrd Biotechnology Science Center, Progenesis Technologies, LLC, One John Marshall Drive, Suite 314, Huntington, WV, 25755, USA.
Brandon D KirbyRobert C. Byrd Biotechnology Science Center, Progenesis Technologies, LLC, One John Marshall Drive, Suite 314, Huntington, WV, 25755, USA.
Thomas R WithersRobert C. Byrd Biotechnology Science Center, Progenesis Technologies, LLC, One John Marshall Drive, Suite 314, Huntington, WV, 25755, USA.
Shannon L JohnsonLos Alamos National Laboratory, Biosecurity and Public Health, PO Box 1663 M888, Los Alamos, NM 87545, NM, USA.ORCID 0000-0002-3972-9208
Timothy E LongDepartment of Pharmaceutical Science and Research, School of Pharmacy, Marshall University, Huntington, WV, 25755, USA.
Youai HaoDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.
Joseph S LamDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.ORCID 0000-0002-1822-1165
Richard M NilesRobert C. Byrd Biotechnology Science Center, Progenesis Technologies, LLC, One John Marshall Drive, Suite 314, Huntington, WV, 25755, USA.
Hongwei D YuRobert C. Byrd Biotechnology Science Center, Progenesis Technologies, LLC, One John Marshall Drive, Suite 314, Huntington, WV, 25755, USA.ORCID 0000-0002-8546-0158
Marshall University · USUniversity of Guelph · CALos Alamos National Laboratory · US

Funding

WV INBRE: The Inhibitor of Growth Family Member 4 (ING4) inhibits L-Type Amino Acid Transporter 1 (LAT1) expression to suppress Breast CancerP20GM103434 · NIGMS · MARSHALL UNIVERSITY · PI Travis Salisbury · 2012 to 2026
$61.1M
Bioengineering a non-pathogenic bacteria to produce medically-relevant biopolymersR44GM113545 · NIGMS · PROGENESIS TECHNOLOGIES, LLC · PI NILES, RICHARD M. · 2017 to 2018
$1.1M
NIGMS NIH HHS P20 GM103434NIGMS NIH HHS R44 GM113545NIH HHS P20GM103434NIH HHS R44GM113545
6 · The paper itself

Abstract

Alginate is an important polysaccharide that is commonly used as a gelling agent in foods, cosmetics and healthcare products. Currently, all alginate used commercially is extracted from brown seaweed. However, with environmental changes such as increasing ocean temperature and the increasing number of biotechnological uses of alginates with specific properties, there is an emerging need for more reliable and customizable sources of alginate. An alternative to seaweed for alginate production is Pseudomonas aeruginosa, a common Gram-negative bacterium that can form alginate-containing biofilms. However, P. aeruginosa is an opportunistic pathogen that can cause life-threatening infections in immunocompromised patients. Therefore, we sought to engineer a non-pathogenic P. aeruginosa strain that is safe for commercial production of alginate. Using a homologous recombination strategy, we sequentially deleted five key pathogenicity genes from the P. aeruginosa chromosome, resulting in the marker-free strain PGN5. Intraperitoneal injection of mice with PGN5 resulted in 0% mortality, while injection with wild-type P. aeruginosa resulted in 95% mortality, providing evidence that the systemic virulence of PGN5 is highly attenuated. Importantly, PGN5 produces large amounts of alginate in response to overexpression of MucE, an activator of alginate biosynthesis. The alginate produced by PGN5 is structurally identical to alginate produced by wild-type P. aeruginosa, indicating that the alginate biosynthetic pathway remains functional in this modified strain. The genetic versatility of P. aeruginosa will allow us to further engineer PGN5 to produce alginates with specific chemical compositions and physical properties to meet different industrial and biomedical needs.

Indexed as

Pseudomonas aeruginosaPseudomonas InfectionsAlginatesAnimalsBiofilmsBiosynthetic PathwaysGlucuronic AcidHexuronic AcidsHumansMicePolysaccharidesAlginatesGlucuronic AcidHexuronic AcidsPolysaccharides

Identifiers

PMID31006977
PMCPMC6922527
OpenAlexW2941095391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.