Evidence map›Paper›PMID 31006173›Full record

ArticleMicrobial biotechnology2019

Innovative microscale workflow from fungi cultures to Cell Wall-Degrading Enzyme screening.

Roxane Raulo, Egon Heuson, Ali Siah, Vincent Phalip, Renato Froidevaux

Abstract read
In one paragraph

Article in Microbial biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Physiological mechanism of improved tolerance ofBiotechnology for biofuels · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Roxane RauloEA 7394 - ICV - Institut Charles Viollette, Univ. Lille 1, ISA, INRA, Univ. Artois, Univ. Littoral Côte d'Opale, F-59000, Lille, France.ORCID 0000-0001-8912-8219
Egon HeusonEA 7394 - ICV - Institut Charles Viollette, Univ. Lille 1, ISA, INRA, Univ. Artois, Univ. Littoral Côte d'Opale, F-59000, Lille, France.
Ali SiahEA 7394 - ICV - Institut Charles Viollette, Univ. Lille 1, ISA, INRA, Univ. Artois, Univ. Littoral Côte d'Opale, F-59000, Lille, France.
Vincent PhalipEA 7394 - ICV - Institut Charles Viollette, Univ. Lille 1, ISA, INRA, Univ. Artois, Univ. Littoral Côte d'Opale, F-59000, Lille, France.
Renato FroidevauxEA 7394 - ICV - Institut Charles Viollette, Univ. Lille 1, ISA, INRA, Univ. Artois, Univ. Littoral Côte d'Opale, F-59000, Lille, France.ORCID 0000-0001-6007-0754

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed at developing a complete miniaturized high-throughput screening workflow for the evaluation of the Cell Wall-Degrading Enzyme (CWDE) activities produced by any fungal strain directly cultivated on raw feedstock in a submerged manner. In this study, wheat straw was selected as model substrate as it represents an important carbon source but yet poorly valorised to yield high added value products. Fungi were grown in a microbioreactor in a high-throughput (HT) way to replace the fastidious shaking flask cultivations. Both approaches were compared in order to validate our new methodology. The range of CWDE activities produced from the cultures was assayed using AZO-died and pNP-linked substrates in an SBS plate format using a Biomek FXp pipetting platform. As highlighted in this study, it was shown that the CWDE activities gathered from the microbioreactor cultivations were similar or higher to those obtained from shake flasks cultures, with a lower standard deviation on the measured values, making this new method much faster than the traditional one and suitable for HT CWDE production thanks to its pipetting platform compatibility. Also, the results showed that the enzymatic activities measured were the same when doing the assay manually or using the automated method.

Indexed as

CellulasesCell WallFungiHigh-Throughput Screening AssaysMicrobiological TechniquesTriticumWorkflowCellulases

Identifiers

PMID31006173
PMCPMC6801129

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.