Evidence map›Paper›PMID 31004054›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Alarmone Ap4A is elevated by aminoglycoside antibiotics and enhances their bactericidal activity.

Xia Ji, Jin Zou, Haibo Peng, Anne-Sophie Stolle, Ruiqiang Xie, Hongjie Zhang, Bo Peng, John J Mekalanos, Jun Zheng

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 63 citations in OpenAlex.

  1. Detection and sequencing of ApProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Loss of the ApJournal of bacteriology · 2026
    Article
  3. Article
  4. Article
  5. Molecular insights into the promiscuous ApThe Journal of biological chemistry · 2026
    Article
  6. ApaH decaps NpNature chemical biology · 2026
    Article
  7. Molecular insight into 5' RNA capping with NpNature chemical biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Xia JiFaculty of Health Sciences, University of Macau, Macau SAR, China.
Jin ZouFaculty of Health Sciences, University of Macau, Macau SAR, China.
Haibo PengFaculty of Health Sciences, University of Macau, Macau SAR, China.
Anne-Sophie StolleDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115.
Ruiqiang XieFaculty of Health Sciences, University of Macau, Macau SAR, China.
Hongjie ZhangFaculty of Health Sciences, University of Macau, Macau SAR, China.
Bo PengSchool of Life Sciences, Sun Yat-sen University, Guangzhou 510006, China.ORCID 0000-0002-5698-6097
John J MekalanosDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115; junzheng@um.edu.mo john_mekalanos@hms.harvard.edu.
Jun ZhengFaculty of Health Sciences, University of Macau, Macau SAR, China; junzheng@um.edu.mo john_mekalanos@hms.harvard.edu.
University of Macau · MOHarvard University · USSun Yat-sen University · CN

Funding

Genetic analysis of toxinogenesis of Vibrio choleraeR37AI018045 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI John Joseph Mekalanos · 1989 to 2026
$12.8M
COORDINATE REGULATION OF BACTERIAL VIRULENCE FACTORSR01AI026289 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MEKALANOS, JOHN JOSEPH · 1988 to 2018
$8.3M
NIAID NIH HHS R01 AI026289NIAID NIH HHS R37 AI018045
6 · The paper itself

Abstract

Second messenger molecules play important roles in the responses to various stimuli that can determine a cell's fate under stress conditions. Here, we report that lethal concentrations of aminoglycoside antibiotics result in the production of a dinucleotide alarmone metabolite-diadenosine tetraphosphate (Ap4A), which promotes bacterial cell killing by this class of antibiotics. We show that the treatment of

Indexed as

Acid Anhydride HydrolasesAcinetobacter baumanniiAnti-Bacterial AgentsCarrier ProteinsDinucleoside PhosphatesEscherichia coliEscherichia coli ProteinsKanamycinPseudomonas aeruginosaAcid Anhydride HydrolasesAnti-Bacterial AgentsApaH protein, E coliCarrier Proteinsdiadenosine tetraphosphateDinucleoside PhosphatesEscherichia coli ProteinsKanamycinLysU protein, E colialarmoneaminoglycosideantibiotic actiondiadenosine tetraphosphate Ap4Akanamycin

Identifiers

PMID31004054
PMCPMC6511005
OpenAlexW2939379351

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.