Evidence map›Paper›PMID 31003719›Full record

ReviewTrends in biotechnology2019

Engineering Polymerases for New Functions.

Timothy A Coulther, Hannah R Stern, Penny J Beuning

Open access · greenAbstract readReview
In one paragraph

Review in Trends in biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. DNA storage-from natural biology to synthetic biology.Computational and structural biotechnology journal · 2023
    Review
  12. Thermophilic Nucleic Acid Polymerases and Their Application in Xenobiology.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Article
  15. Loop-Mediated Isothermal Amplification: From Theory to Practice.Russian journal of bioorganic chemistry · 2022
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Timothy A CoultherDepartment of Chemistry & Chemical Biology, Northeastern University, Boston, MA 02115, USA.
Hannah R SternDepartment of Chemistry & Chemical Biology, Northeastern University, Boston, MA 02115, USA.
Penny J BeuningDepartment of Chemistry & Chemical Biology, Northeastern University, Boston, MA 02115, USA. Electronic address: beuning@neu.edu.
Northeastern University · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Dynamics of Processivity Clamp Proteins in Bacterial DNA ReplicationR01GM123239 · NIGMS · NORTHEASTERN UNIVERSITY · PI BEUNING, PENNY J, KORZHNEV, DMITRY M. · 2017 to 2021
$1.8M
NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R01 GM123239
6 · The paper itself

Abstract

DNA polymerases are critical tools in biotechnology, enabling efficient and accurate amplification of DNA templates, yet many desired functions are not readily available in natural DNA polymerases. New or improved functions can be engineered in DNA polymerases by mutagenesis or through the creation of protein chimeras. Engineering often necessitates the development of new techniques, such as selections in water-in-oil emulsions that connect genotype to phenotype and allow more flexibility in engineering than phage display. Engineering efforts have led to DNA polymerases that can withstand extreme conditions or the presence of inhibitors, as well as polymerases with the ability to copy modified DNA templates. In this review we discuss polymerases for biotechnology that have been reported along with tools to enable further development.

Indexed as

DNA-Directed DNA PolymeraseProtein EngineeringRecombinant ProteinsSubstrate SpecificitySynthetic BiologyDNA-Directed DNA PolymeraseRecombinant ProteinsDNA damageDNA modificationDNA polymerasefidelityprocessivity

Identifiers

PMID31003719
PMCPMC6745271
OpenAlexW2938267955

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.