Evidence map›Paper›PMID 31002057›Full record

ArticleEmerging infectious diseases2019

Novel Sequence Type in Bacillus cereus Strains Associated with Nosocomial Infections and Bacteremia, Japan.

Reiko Akamatsu, Masato Suzuki, Keiji Okinaka, Teppei Sasahara, Kunikazu Yamane, Satowa Suzuki, Daisuke Fujikura, Yoshikazu Furuta, Naomi Ohnishi, Minoru Esaki and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

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  9. Baseline and seasonal trends ofInfection prevention in practice · 2023
    Article
  10. Article
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  13. Phylogenetic Analysis ofMicroorganisms · 2020
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Reiko Akamatsu
Masato Suzuki
Keiji Okinaka
Teppei Sasahara
Kunikazu Yamane
Satowa Suzuki
Daisuke Fujikura
Yoshikazu Furuta
Naomi Ohnishi
Minoru Esaki
Keigo Shibayama
Hideaki Higashi
National Institute of Infectious Diseases · JPHokkaido University · JPJichi Medical University · JPMedscape · USJapanese Foundation For Cancer Research · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus cereus is associated with foodborne illnesses characterized by vomiting and diarrhea. Although some B. cereus strains that cause severe extraintestinal infections and nosocomial infections are recognized as serious public health threats in healthcare settings, the genetic backgrounds of B. cereus strains causing such infections remain unknown. By conducting pulsed-field gel electrophoresis and multilocus sequence typing, we found that a novel sequence type (ST), newly registered as ST1420, was the dominant ST isolated from the cases of nosocomial infections that occurred in 3 locations in Japan in 2006, 2013, and 2016. Phylogenetic analysis showed that ST1420 strains belonged to the Cereus III lineage, which is much closer to the Anthracis lineage than to other Cereus lineages. Our results suggest that ST1420 is a prevalent ST in B. cereus strains that have caused recent nosocomial infections in Japan.

Indexed as

BacteremiaAllelesBacillus cereusCross InfectionDNA, BacterialGenes, BacterialGenotypeGram-Positive Bacterial InfectionsHumansJapanMolecular TypingPhylogenyDNA, BacterialBacillus cereusbacteremiabacteriaenteric infectionsfood safetyJapanmultilocus sequence typingnosocomial infectionsphylogenetic analysispulsed-field gel electrophoresisrepetitive-element PCR

Identifiers

PMID31002057
PMCPMC6478208
OpenAlexW2936219729

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.