Evidence map›Paper›PMID 31001806›Full record

ArticleFEBS letters2019

Paip2 cooperates with Cbp80 at an active promoter and participates in RNA Polymerase II phosphorylation in Drosophila.

Zaur M Kachaev, Lyubov A Lebedeva, Alexander V Shaposhnikov, James J Moresco, John R Yates, Paul Schedl, Yulii V Shidlovskii

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Zaur M KachaevInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Lyubov A LebedevaInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Alexander V ShaposhnikovInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
James J MorescoDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA, USA.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA, USA.
Paul SchedlInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Yulii V ShidlovskiiInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-3643-9889
Institute of Gene Biology · RUScripps Research Institute · USPrinceton University · USSechenov University · RU

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
Genetic regulatory mechanism in development and differentiationR35GM126975 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2018 to 2022
$3.0M
NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R35 GM126975Russian Science Foundation 16-14-10346
6 · The paper itself

Abstract

The Paip2 protein is a factor regulating mRNA translation and stability in the cytoplasm. It has also been found in the nuclei of several cell types in Drosophila. Here, we aim to elucidate the functions of Paip2 in the cell nucleus. We find that nuclear Paip2 is a component of an ~300-kDa protein complex. Paip2 interacts with mRNA capping factor and factors of RNA polymerase II (Pol II) transcription initiation and early elongation. Paip2 functionally cooperates with the Cbp80 subunit of the cap-binding complex, with both proteins ensuring proper Pol II C-terminal domain (CTD) Ser5 phosphorylation at the promoter. Thus, Paip2 is a novel player at the stage of mRNA capping and early Pol II elongation.

Indexed as

Promoter Regions, GeneticAnimalsCell LineDNADrosophila melanogasterDrosophila ProteinsGene Expression RegulationNuclear Cap-Binding Protein ComplexPhosphorylationPoly(A)-Binding ProteinsProtein Processing, Post-TranslationalRNA Polymerase IICbp80 protein, DrosophilaDNADrosophila ProteinsNuclear Cap-Binding Protein ComplexPaip2 protein, DrosophilaPoly(A)-Binding ProteinsRNA Polymerase IIcappingCbp80Paip2promoterprotein complextranscription

Identifiers

PMID31001806
PMCPMC6538421
OpenAlexW2937617824

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.