Evidence map›Paper›PMID 31000656›Full record

ArticleScience (New York, N.Y.)2019

Spontaneous behaviors drive multidimensional, brainwide activity.

Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 868 papers.

0numbers the graph read from it
0cells of the map it votes in
868citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

868 citing papers in PubMed.

  1. Article
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  5. Ultrafast venous and sagittal sinus constrictions in the brain driven by abdominal pressure.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  6. Article
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  9. Article
  10. A silent leap in neuroimaging.Nature neuroscience · 2026
    Article
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  20. Article

808 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Carsen Stringer *HHMI Janelia Research Campus, Ashburn, VA 20147, USA. stringerc@janelia.hhmi.org pachitarium@janelia.hhmi.org kenneth.harris@ucl.ac.uk.ORCID 0000-0002-9229-4100
Marius Pachitariu *HHMI Janelia Research Campus, Ashburn, VA 20147, USA. stringerc@janelia.hhmi.org pachitarium@janelia.hhmi.org kenneth.harris@ucl.ac.uk.ORCID 0000-0001-7106-814X
Nicholas SteinmetzUCL Institute of Ophthalmology, London EC1V 9EL, UK.ORCID 0000-0001-7029-2908
Charu Bai ReddyUCL Institute of Ophthalmology, London EC1V 9EL, UK.ORCID 0000-0002-8195-3326
Matteo Carandini *UCL Institute of Ophthalmology, London EC1V 9EL, UK.ORCID 0000-0003-4880-7682
Kenneth D Harris *UCL Institute of Neurology, London WC1E 6DE, UK. stringerc@janelia.hhmi.org pachitarium@janelia.hhmi.org kenneth.harris@ucl.ac.uk.

Funding

European Research Council 694401Wellcome Trust 095668Wellcome Trust 095669Wellcome Trust 108726Wellcome Trust 204915Wellcome Trust 204915/Z/16/ZWellcome Trust 205093Wellcome Trust 205093/Z/16/Z
6 · The paper itself

Abstract

Neuronal populations in sensory cortex produce variable responses to sensory stimuli and exhibit intricate spontaneous activity even without external sensory input. Cortical variability and spontaneous activity have been variously proposed to represent random noise, recall of prior experience, or encoding of ongoing behavioral and cognitive variables. Recording more than 10,000 neurons in mouse visual cortex, we observed that spontaneous activity reliably encoded a high-dimensional latent state, which was partially related to the mouse's ongoing behavior and was represented not just in visual cortex but also across the forebrain. Sensory inputs did not interrupt this ongoing signal but added onto it a representation of external stimuli in orthogonal dimensions. Thus, visual cortical population activity, despite its apparently noisy structure, reliably encodes an orthogonal fusion of sensory and multidimensional behavioral information.

Indexed as

AnimalsBehaviorCalciumEvoked Potentials, VisualFunctional NeuroimagingMiceNeuronsPhotic StimulationVisual CortexCalcium

Identifiers

PMID31000656
PMCPMC6525101

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.