Evidence map›Paper›PMID 30999697›Full record

ArticleCancers2019

Clinical Implications of Noncoding Indels in the Surfactant-Encoding Genes in Lung Cancer.

Takahiro Nakagomi, Yosuke Hirotsu, Taichiro Goto, Daichi Shikata, Yujiro Yokoyama, Rumi Higuchi, Sotaro Otake, Kenji Amemiya, Toshio Oyama, Hitoshi Mochizuki and 1 more

Abstract read
In one paragraph

Article in Cancers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Journal of personalized medicine · 2021
    Article
  6. Journal of personalized medicine · 2021
    Article
  7. Article
  8. Article
  9. Airway Microbiota as a Modulator of Lung Cancer.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Takahiro NakagomiLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. nakagomi.takahiro@gmail.com.
Yosuke HirotsuGenome Analysis Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. hirotsu-bdyu@ych.pref.yamanashi.jp.
Taichiro GotoLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. taichiro@1997.jukuin.keio.ac.jp.
Daichi ShikataLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. shikarupd@yahoo.co.jp.
Yujiro YokoyamaLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. dooogooodooo@me.com.
Rumi HiguchiLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. lumi.hgc.236@gmail.com.
Sotaro OtakeLung Cancer and Respiratory Disease Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. sotaro.otake@gmail.com.
Kenji AmemiyaGenome Analysis Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. amemiya-bdcd@ych.pref.yamanashi.jp.
Toshio OyamaDepartment of Pathology, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. t-oyama@ych.pref.yamanashi.jp.
Hitoshi MochizukiGenome Analysis Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. h-mochiduki2a@ych.pref.yamanashi.jp.
Masao OmataGenome Analysis Center, Yamanashi Central Hospital, Yamanashi 400-8506, Japan. m-omata0901@ych.pref.yamanashi.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung cancer arises from the accumulation of genetic mutations, usually in exons. A recent study identified indel mutations in the noncoding region of surfactant-encoding genes in lung adenocarcinoma cases. In this study, we recruited 94 patients with 113 lung cancers (88 adenocarcinomas, 16 squamous cell carcinomas, and nine other histologies) who had undergone surgery in our department. A cancer panel was designed in-house for analyzing the noncoding regions, and targeted sequencing was performed. Indels in the noncoding region of surfactant-encoding genes were identified in 29/113 (25.7%) cases and represent the precise cell of origin for the lung cancer, irrespective of histological type and/or disease stage. In clinical practice, these indels may be used as clonal markers in patients with multiple cancers and to determine the origin of cancer of unknown primary site.

Indexed as

cancer of unknown originindellung cancermutationtargeted sequencinguntranslated region

Identifiers

PMID30999697
PMCPMC6520783

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.